Gene Hore_15470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15470 
Symbol 
ID7313144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1656103 
End bp1657068 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content45% 
IMG OID643611993 
Productregulatory protein GntR HTH 
Protein accessionYP_002509291 
Protein GI220932383 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000230103 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATAA AGGTTGACAG GGAGTCGGCA GTGCCTATTT ATGTTCAGAT TAAGAATCAG 
ATTAAAACAA TGGTGGAGCG AGGAATTTTA TCCCGGGGGG ATCGCCTACC TCCGGAACGG
GAACTGGCTG AAGAACTAAA GGTAAGCCGG AACAGGGTCA GTACTGCCTA TAAAGAACTT
GAGGCAGAGG GTATTGTATC TTCACAGCAG GGAAAGGGGA CATTTATAGC CGGTAAGGTA
TCAGGAGTCA GGGAGCCGAG CCGCAAGGAT AAGCTCTTGA AGATAATCGA TCTGGCCATG
GAGGAGGCCA TCGGCCTGGG GTTTAGCCTT GATGATTTCT TAACTATTGC CTATGTCAGG
GCTAAAGAAA AAGAGGAGAT GCTCAGTAAG ATAAAAGTCG CCTTTATTGA ATGTAACCAG
GAGCAGCTTT CAGCCCTGAT GGTGGATGCC GGTCTTGACC CCGGTATTGC CTGTATCCCG
GTGTTAATAG GTGACCTTAG GGAAAATCCT CAAAAAACCA GAAAGATCCT GGACCGGGTA
GAGATGATCG TTACTACCCC CTTCCACCTC CAGGAGGTTG AAGAGTTTGT GTCTGGAATG
GATAAAGAAG TTATAGATAT GAACCTGGAA CCGAAAATGG ACACCATCGT TAAACTGGCC
CGGATAAAGC CGGGTTCCAG TATCGGGTTA ATATGTCTTT CTGATTACTT TGCCCGGGAA
GTGGAGAGGT CCCTTACCAA AACCAGTTTA AATAATTTCA AACTTAATTA TACTACTACC
GAGGATAAAG AAGAATTAGA GGAATTTATA GCAAGGTATG ATATTTTAAT AACCTCCCCC
CATCGGTTTA AGGAGATTCA AAAACTGGCC GGTGGCGAAA GGCAGGTAAT ACCCTTTGAG
TATACCCCGG ACCGGGGTTC GGTCAACCTT CTTAAAATGG CCCTTCTTGA TATTAAACAA
ATTTAA
 
Protein sequence
MQIKVDRESA VPIYVQIKNQ IKTMVERGIL SRGDRLPPER ELAEELKVSR NRVSTAYKEL 
EAEGIVSSQQ GKGTFIAGKV SGVREPSRKD KLLKIIDLAM EEAIGLGFSL DDFLTIAYVR
AKEKEEMLSK IKVAFIECNQ EQLSALMVDA GLDPGIACIP VLIGDLRENP QKTRKILDRV
EMIVTTPFHL QEVEEFVSGM DKEVIDMNLE PKMDTIVKLA RIKPGSSIGL ICLSDYFARE
VERSLTKTSL NNFKLNYTTT EDKEELEEFI ARYDILITSP HRFKEIQKLA GGERQVIPFE
YTPDRGSVNL LKMALLDIKQ I