Gene Hore_15130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15130 
Symbol 
ID7313106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1615137 
End bp1616114 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content36% 
IMG OID643611956 
ProductCRISPR-associated RAMP protein, Cmr4 family 
Protein accessionYP_002509258 
Protein GI220932350 
COG category[L] Replication, recombination and repair 
COG ID[COG1336] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR02580] CRISPR-associated RAMP protein, Cmr4 family 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAGG AAACTGCAAT ACTTGGTTTA TACTGTGAAA CTTCTGTACA TGCAGGGAGT 
GGTAGTGATT TAGGTGTTAT TGATTTACCT ATTCAAAGGG AAAAATATAC TGACTATCCT 
GTGTTTCAGG CCTCTACATT AAAAGGTGCC TTGAGGGCAA GTTTTGATAC AGAAATAGCC 
ATTGTTAATT CTTTAATGAA AGGAGTATTT AAAAGTTTTT CATTTAAAAA TGCCAAAGAG 
GGTGAAGAAG AACTAGAAAA AGCTATAAAC CTTGTTTTTG GAGATGAAAG CAATAAATCT 
GCTTCAGCCC TGGCTTTTAC AGATGCCAGA ATACTATTGT TTCCCGTAAA GTCAGCTAGA 
AACGTTTTTG CCTGGATAAC TTCACCAATG GTCTTAAACA GGTTGAAAAG GGATCTGGAA 
GTAGCAGGGA TTAATGTCGA CTGGGAAGCC CCCGAAATTA AAAAGGATGC GATTATCAGT 
GAAAAATCCA GTCTTGATAT AGATGGAAAT ATTATTCTTG AAGAATATAC CTATAGTGTT 
AATAAACAAA ATATAGAGGG AATTACAAAC TGGATAAGAG ATAATATTTT TGCAGAAGAT 
TATACTTTCT GGAGGGACAA ATTGGAAAGT GACCTGGTAA TAATTGATGA TGATGAATTC 
AAGGATTTTG TCAGTATGTC AACAGAGTTA GTTCCCCGTA TCAAAATTAA GAATGAAACT 
AAAGTGGTTG ATAAAGATGG GGGCGCTCTC TGGTATGAAG AGAATTTACC GCCAGAAACA 
GTACTATACA GTCTGGTTTT GGCCACCGAT ATTTTAAGAG AAGAAAAAGA TTTAGAAAAT 
GAAGACCTTA AAAAAGCTGA GAATGTAATA CAATTTTTTG AAGAAGGACT AAAAGAAAGA 
ATACAGCTGG GGGGAAATGA AACCATTGGC CGGGGAATCA TTAGAACCAG GCTTGTAAGG 
AGTGGTAAAA ATGGGTAA
 
Protein sequence
MYKETAILGL YCETSVHAGS GSDLGVIDLP IQREKYTDYP VFQASTLKGA LRASFDTEIA 
IVNSLMKGVF KSFSFKNAKE GEEELEKAIN LVFGDESNKS ASALAFTDAR ILLFPVKSAR 
NVFAWITSPM VLNRLKRDLE VAGINVDWEA PEIKKDAIIS EKSSLDIDGN IILEEYTYSV 
NKQNIEGITN WIRDNIFAED YTFWRDKLES DLVIIDDDEF KDFVSMSTEL VPRIKIKNET 
KVVDKDGGAL WYEENLPPET VLYSLVLATD ILREEKDLEN EDLKKAENVI QFFEEGLKER 
IQLGGNETIG RGIIRTRLVR SGKNG