| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_15100 |
|---|
| Symbol | |
|---|
| ID | 7313103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1612406 |
|---|
| End bp | 1613620 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 643611953 |
|---|
| Product | putative CRISPR-associated protein, APE2256 family |
|---|
| Protein accession | YP_002509255 |
|---|
| Protein GI | 220932347 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4006] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | [TIGR02619] putative CRISPR-associated protein, APE2256 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TATTAACTAC TGTGGGTACA TCATTATTAA CACATTTAAG GGAAGAAGAA
GAGATAGGCA AAAGTGAATA TGATTATTTT CTTGATAATA AGGATGATGT AGATAAAGTT
TATTATGATA GGAAAGGAAA GGACAAAATA CATAGGTTAA AGAAAGTAGC TTTAAATTAT
TTGTCAAAAA AGGATATCAA CAATAATGAA GATTTAAATA ATATGTCAGC TGAATTAAAA
AGCATTAAAA AAATAATTGA ATATAAAAAT ATCAAACAAT ATGAGATAAT ATTTATATGT
AGTGATACTC TTGCTGGTAA GGTTGTTACA GATATACTAA TGGATTATAT AATTGAAAGT
AAATTTAATT ATACAGATAT TAAGACTAAA TTGATTAAAA AATTACAGGT TCAAAATAAA
GCCCGTTTTG AAAAAAGTGG TGTACATAAT CTTATAGAGT ATATTAATAC AATGGTTAAT
AATACAGGTA GTAATAATTT AATATTAAAT ATTACAGGTG GATATAAATC TGTTGTTCCT
TATATGACTA TAATGGGATA TGTAAATGAA ATTCCAGTAT ATTATATATT TGAGGAGACA
AATGAACTGA TAGAATTACC TTTAATACCT ATCAAAGTTG ATGAAGAATT ATTTAAAAAG
TATATGTGCG AAATACATCA AATTATGGAT AAAGGTGTTA TTAATAAAGA TCTTCTTGAA
CAAATATTGA ACAAAGTTGA TTGGAATGAT AAACAACTAA TTAAAACGAG ATTATTACAA
AATGATTTAC AGGAACCAGA TTATTATTAT CCTAGTCCAA TAACAAGGAT TTTTTGGGAA
AAATTCAAAA GCAATTACAT ATTTAACATT GAATTATCTG ACAGTGCCTA CGAATTTTAC
AGTAGAAAAG AAGAACGTGC AAGATTTATT CTGGAAAAAG TTAGTGATTA CGACTTAAGA
AAGAAACATT ATCATTATAT AAAAGGAACG GATATGGATT GTTATAAATC AGGAGGAGAA
GAACTTTTTA GAGTATTTTA TAAAGTTTAT GATAAAGAGG ATAGAAATGC TATAGTTAAA
GTGGCTGAAA TATTTGATCT GGCACATAAG ACAAATGAAT ATGATAATTT CTGCAAAGCA
CCTCGAAATT CGAATGAGTA TCAGTTTAAT AAATGTATTA TTAAAAAGAG TAATAAATCA
ATTGAGAGGT GTTAA
|
|---|
| Protein sequence | MKKILTTVGT SLLTHLREEE EIGKSEYDYF LDNKDDVDKV YYDRKGKDKI HRLKKVALNY
LSKKDINNNE DLNNMSAELK SIKKIIEYKN IKQYEIIFIC SDTLAGKVVT DILMDYIIES
KFNYTDIKTK LIKKLQVQNK ARFEKSGVHN LIEYINTMVN NTGSNNLILN ITGGYKSVVP
YMTIMGYVNE IPVYYIFEET NELIELPLIP IKVDEELFKK YMCEIHQIMD KGVINKDLLE
QILNKVDWND KQLIKTRLLQ NDLQEPDYYY PSPITRIFWE KFKSNYIFNI ELSDSAYEFY
SRKEERARFI LEKVSDYDLR KKHYHYIKGT DMDCYKSGGE ELFRVFYKVY DKEDRNAIVK
VAEIFDLAHK TNEYDNFCKA PRNSNEYQFN KCIIKKSNKS IERC
|
|---|
| |