Gene Hore_15020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15020 
Symbol 
ID7313095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1604274 
End bp1605131 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content28% 
IMG OID643611945 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002509247 
Protein GI220932339 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTAGAT TTATAAAAAT AAAAAGAACA GATTTTAGTA TAGAAAATAT ATTAATCTGG 
GTTGCTTATA TATTAGTTTC CCTGTTTTTT ATGTTTCCTG TACTTTGGGT TATTTCATTG
TCATTTAAAA CTACAGCAGA AGTTTTTGCT TATCCACCAA ATTTAATACC CAAAAATATT
ACAATTAATA ACTTCATTGA AGTACTAAAA AATACATCTA TGTTTCAGTA TATACTTAAC
TCTTTTAAAT TAGTGCTTTT TACTGTTGTA GGAACTTTAT TAGTTGCTAT TCCAGCAGGA
TATAGTTTTT CGCGCTTTAC CTTTAAAAAC AAAAATAAAC TATTATTTGC AATATTAGTT
TTTCAAATGG TTTCACCGAT TATTATTGGA ATTCCTCTTT ACCGATATTA TTCAAGTTTA
GGATTATTAA ATAGTTATTT CGGTTTAATT ATGGCTTATA TAGCTATTCA GGTTCCTTTT
GCTACTTTTT TGTTAAAAGG TGGTTTTGAT AATATTCCTC AAGAAATAGA CGAAGCAGCT
AAAATAGATG GGGCGACAAG GATACAGTTA TTAACAAAGA TTATAGTTCC TGTATCTCTA
CCTTCAATTG CTAGTGCAAT AATATTTATA AGTATTAATT CCTGGGCTCA ATTTTTATTA
CCGTATTTGT TATTAAATAA AGATAAATTT TATCCTGTTT CTGTAGGGAT CTTAATGGCC
CAAGGGACAT TTCAACAGAT AAGTACACAT CTAATAGAAG CAGCAAGTGT ATTATCCTTA
ATTCCTGCGA TAATTTTGGT TCTATTTTTA CAAAAATTCA TTTTGAAAGC TTTAACTTCT
GGAGCTGTTA AAGGGTAA
 
Protein sequence
MCRFIKIKRT DFSIENILIW VAYILVSLFF MFPVLWVISL SFKTTAEVFA YPPNLIPKNI 
TINNFIEVLK NTSMFQYILN SFKLVLFTVV GTLLVAIPAG YSFSRFTFKN KNKLLFAILV
FQMVSPIIIG IPLYRYYSSL GLLNSYFGLI MAYIAIQVPF ATFLLKGGFD NIPQEIDEAA
KIDGATRIQL LTKIIVPVSL PSIASAIIFI SINSWAQFLL PYLLLNKDKF YPVSVGILMA
QGTFQQISTH LIEAASVLSL IPAIILVLFL QKFILKALTS GAVKG