Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_15020 |
Symbol | |
ID | 7313095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1604274 |
End bp | 1605131 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643611945 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002509247 |
Protein GI | 220932339 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTAGAT TTATAAAAAT AAAAAGAACA GATTTTAGTA TAGAAAATAT ATTAATCTGG GTTGCTTATA TATTAGTTTC CCTGTTTTTT ATGTTTCCTG TACTTTGGGT TATTTCATTG TCATTTAAAA CTACAGCAGA AGTTTTTGCT TATCCACCAA ATTTAATACC CAAAAATATT ACAATTAATA ACTTCATTGA AGTACTAAAA AATACATCTA TGTTTCAGTA TATACTTAAC TCTTTTAAAT TAGTGCTTTT TACTGTTGTA GGAACTTTAT TAGTTGCTAT TCCAGCAGGA TATAGTTTTT CGCGCTTTAC CTTTAAAAAC AAAAATAAAC TATTATTTGC AATATTAGTT TTTCAAATGG TTTCACCGAT TATTATTGGA ATTCCTCTTT ACCGATATTA TTCAAGTTTA GGATTATTAA ATAGTTATTT CGGTTTAATT ATGGCTTATA TAGCTATTCA GGTTCCTTTT GCTACTTTTT TGTTAAAAGG TGGTTTTGAT AATATTCCTC AAGAAATAGA CGAAGCAGCT AAAATAGATG GGGCGACAAG GATACAGTTA TTAACAAAGA TTATAGTTCC TGTATCTCTA CCTTCAATTG CTAGTGCAAT AATATTTATA AGTATTAATT CCTGGGCTCA ATTTTTATTA CCGTATTTGT TATTAAATAA AGATAAATTT TATCCTGTTT CTGTAGGGAT CTTAATGGCC CAAGGGACAT TTCAACAGAT AAGTACACAT CTAATAGAAG CAGCAAGTGT ATTATCCTTA ATTCCTGCGA TAATTTTGGT TCTATTTTTA CAAAAATTCA TTTTGAAAGC TTTAACTTCT GGAGCTGTTA AAGGGTAA
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Protein sequence | MCRFIKIKRT DFSIENILIW VAYILVSLFF MFPVLWVISL SFKTTAEVFA YPPNLIPKNI TINNFIEVLK NTSMFQYILN SFKLVLFTVV GTLLVAIPAG YSFSRFTFKN KNKLLFAILV FQMVSPIIIG IPLYRYYSSL GLLNSYFGLI MAYIAIQVPF ATFLLKGGFD NIPQEIDEAA KIDGATRIQL LTKIIVPVSL PSIASAIIFI SINSWAQFLL PYLLLNKDKF YPVSVGILMA QGTFQQISTH LIEAASVLSL IPAIILVLFL QKFILKALTS GAVKG
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