| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_14220 |
|---|
| Symbol | |
|---|
| ID | 7313962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1510425 |
|---|
| End bp | 1510910 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643611862 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002509166 |
|---|
| Protein GI | 220932258 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000000164387 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAA TAGTATGGTA TGTCCTGTTA TTCACTTTAA TAATTATAAT TCAGTTGACT
ATTCCTCCCC GGACATTACA CTTTGATCTC TTTCTGGTAA CAATAATTGT AATGGGATTA
ATTAAGGGTT CCAAAGCCGG AGCCTGGACG GGTTTTATCG GTGGAAATAT ACAGGATTTG
TTTCTGGGAG GTATGTTTGG AACCTATACC ATCGTTAAGC TAATTATGGG TGGCTTATCG
GGGTTGTTAG AGAAAGAATT TTTTAAGGAA AACCCGGTAG TCCCGGTAGC TACTATCTTT
ATTGCCAGTA TTTTTCATGG GTTACTGGTT ATTCTGATTA CAGAGGAACT ATTATTTAAC
ATTAATTTAT TTACCGCTTT AAGACAGACA ATTTTACCTG AGGCGTTTTT TAATAGTATA
GCCGGAATTA TTATCTACTA CATTGTTTAT CGCCTTGAAA GAGGTGGCGA GTTATATTAT
GGTTAA
|
|---|
| Protein sequence | MKKIVWYVLL FTLIIIIQLT IPPRTLHFDL FLVTIIVMGL IKGSKAGAWT GFIGGNIQDL
FLGGMFGTYT IVKLIMGGLS GLLEKEFFKE NPVVPVATIF IASIFHGLLV ILITEELLFN
INLFTALRQT ILPEAFFNSI AGIIIYYIVY RLERGGELYY G
|
|---|
| |