Gene Hore_13980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_13980 
Symbol 
ID7314410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1488339 
End bp1489040 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content36% 
IMG OID643611838 
ProductNitrilase/cyanide hydratase 
Protein accessionYP_002509142 
Protein GI220932234 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0346357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTGG AAATAACCAG AAAAAAAACA TGGAAAAAAG GAGAAAGGGC TTGCCGAAAG 
GCAAGAGAAA AAGAAGCTGA TATAGCTTTA TTTCCAGAAA TGTGGAAAGA ATTTGATGGT 
TCTCCAAGGA ATTCCTTTTC GTTGATTGAC AGGAAAGGTG AAATCATTTT TACCTATGCA 
AAAGTTCATA CATGTGATTT TTCATTGGAA GCAGCCTGTA CTCCAGGTGA AGATTTTTAT 
GTAGGTGAAC TTGACACCAA AAAAGGAATG GTAAAAATAG GAGCAATGAT TTGTTATGAT 
CGTGAGTTTC CAGAAAGTGC AAGAATATTA ATGTTAAAAG GAGCAGAAAT AATCCTGGTT 
CCTAATGCAT GTGATATGAA TGAAATTAGA ACTGATCAGT TAAAGACCAG GGCTTATGAG 
AATATGTTGG GGATAGCTCT TGCAAACTAC CCAGGGCATG GAGGGAAATC AGTTGCTTTT 
GATGGAATGG CCTATTCTAA AGAAGGTAAA ACAAGAGATA TGGTTGTGAT TAAAGCTGTA 
AAAAAGGAAG GAATATATAT AGCAGAATTT AATATGGATG AACTCAGGAA TTATAGAGAA 
AGAGAGAGTT GGGGAAATGC CTTTAGAAAA CCAGGCACAT ATGATATGTT GACCTCTTTC 
AAGGTTGAAA AACCTTTTAT TAGAAAATAT GCAAGAAGAT AG
 
Protein sequence
MPVEITRKKT WKKGERACRK AREKEADIAL FPEMWKEFDG SPRNSFSLID RKGEIIFTYA 
KVHTCDFSLE AACTPGEDFY VGELDTKKGM VKIGAMICYD REFPESARIL MLKGAEIILV 
PNACDMNEIR TDQLKTRAYE NMLGIALANY PGHGGKSVAF DGMAYSKEGK TRDMVVIKAV 
KKEGIYIAEF NMDELRNYRE RESWGNAFRK PGTYDMLTSF KVEKPFIRKY ARR