Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_13190 |
Symbol | |
ID | 7312673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1417705 |
End bp | 1418574 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643611759 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002509064 |
Protein GI | 220932156 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGTGT TTAACAAAAA GCTTTGGGGT ACCATTTTTT TGGGACCAGC TTTTTTAATA ATGGGGATAT ATCTTTTATA CCCATCTCTG CAGACTTTTT TAATGAGTTT TATGGATAGA ACCGGTAGTG AGTTTGTAGG ACTTGAAAAT TATAATTATG CTTTTACAAG TGAGTCGATG TTAATAGCAT TTCGTAATAA TTTATTATGG TTAATAATAT TTACACTGGG TACTGTGGGA CTGGGCTTAA TTTTTGCTAT TTTGACAGAT AAAGTACCCT ATGAAAAGTT AGCTAAATCA ATTATTTTTA TGCCAATGGC TATATCTTTT GTCGGGGCCG GTATCATATG GAAATTTGTA TATACTTATA AGCCTCCAAT TTTCGATCAG ATTGGTTTGC TTAACCAGAT AATGGTTTTA ATCGGAAAAG AACCGAAAGG ATGGTTGTTG GAAGGGCCGT GGGTTAATAA TATAGCATTG ATATATGTAG GAATATGGAT ATGGACAGGG TTCAGTATGG TTATTCTTTC AGCTGCTTAT AAAAATATTC CTTCCCATTT ACTGGAGGCA GCAAAGGTAG ATGGTGCGAA CTGGTGGCAG ACATTTCGTT ATGTTGTTAT ACCGGAATTG TTACCAACTA TAATTGTTGT TATTACCTCA AATGTTATCC GGACTTTTAA AATGTTTGAT ATTATTTATG TCATGACAAA TGGTAACTAT GGAACCGAAG TAATAGCCAA TAGAATGTAT AAAGAAATGT TTAAATACAG GCATTTTGGT CGGGCCAGTG CAATTGCTGT AATTCTGTTT ATATTAGTAC TACCAGTAAT AATTATGAAT ATTAAGAAAA TGAAGCAGGA AAACAACTAA
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Protein sequence | MEVFNKKLWG TIFLGPAFLI MGIYLLYPSL QTFLMSFMDR TGSEFVGLEN YNYAFTSESM LIAFRNNLLW LIIFTLGTVG LGLIFAILTD KVPYEKLAKS IIFMPMAISF VGAGIIWKFV YTYKPPIFDQ IGLLNQIMVL IGKEPKGWLL EGPWVNNIAL IYVGIWIWTG FSMVILSAAY KNIPSHLLEA AKVDGANWWQ TFRYVVIPEL LPTIIVVITS NVIRTFKMFD IIYVMTNGNY GTEVIANRMY KEMFKYRHFG RASAIAVILF ILVLPVIIMN IKKMKQENN
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