Gene Hore_13190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_13190 
Symbol 
ID7312673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1417705 
End bp1418574 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content33% 
IMG OID643611759 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002509064 
Protein GI220932156 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGTGT TTAACAAAAA GCTTTGGGGT ACCATTTTTT TGGGACCAGC TTTTTTAATA 
ATGGGGATAT ATCTTTTATA CCCATCTCTG CAGACTTTTT TAATGAGTTT TATGGATAGA
ACCGGTAGTG AGTTTGTAGG ACTTGAAAAT TATAATTATG CTTTTACAAG TGAGTCGATG
TTAATAGCAT TTCGTAATAA TTTATTATGG TTAATAATAT TTACACTGGG TACTGTGGGA
CTGGGCTTAA TTTTTGCTAT TTTGACAGAT AAAGTACCCT ATGAAAAGTT AGCTAAATCA
ATTATTTTTA TGCCAATGGC TATATCTTTT GTCGGGGCCG GTATCATATG GAAATTTGTA
TATACTTATA AGCCTCCAAT TTTCGATCAG ATTGGTTTGC TTAACCAGAT AATGGTTTTA
ATCGGAAAAG AACCGAAAGG ATGGTTGTTG GAAGGGCCGT GGGTTAATAA TATAGCATTG
ATATATGTAG GAATATGGAT ATGGACAGGG TTCAGTATGG TTATTCTTTC AGCTGCTTAT
AAAAATATTC CTTCCCATTT ACTGGAGGCA GCAAAGGTAG ATGGTGCGAA CTGGTGGCAG
ACATTTCGTT ATGTTGTTAT ACCGGAATTG TTACCAACTA TAATTGTTGT TATTACCTCA
AATGTTATCC GGACTTTTAA AATGTTTGAT ATTATTTATG TCATGACAAA TGGTAACTAT
GGAACCGAAG TAATAGCCAA TAGAATGTAT AAAGAAATGT TTAAATACAG GCATTTTGGT
CGGGCCAGTG CAATTGCTGT AATTCTGTTT ATATTAGTAC TACCAGTAAT AATTATGAAT
ATTAAGAAAA TGAAGCAGGA AAACAACTAA
 
Protein sequence
MEVFNKKLWG TIFLGPAFLI MGIYLLYPSL QTFLMSFMDR TGSEFVGLEN YNYAFTSESM 
LIAFRNNLLW LIIFTLGTVG LGLIFAILTD KVPYEKLAKS IIFMPMAISF VGAGIIWKFV
YTYKPPIFDQ IGLLNQIMVL IGKEPKGWLL EGPWVNNIAL IYVGIWIWTG FSMVILSAAY
KNIPSHLLEA AKVDGANWWQ TFRYVVIPEL LPTIIVVITS NVIRTFKMFD IIYVMTNGNY
GTEVIANRMY KEMFKYRHFG RASAIAVILF ILVLPVIIMN IKKMKQENN