Gene Hore_13090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_13090 
Symbol 
ID7313630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1405335 
End bp1405931 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content38% 
IMG OID643611749 
Productlipoprotein, putative 
Protein accessionYP_002509054 
Protein GI220932146 
COG category[R] General function prediction only 
COG ID[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAT TTAGAGTTAG TTTGCTGGTT GTGTTAGCTT TATTATTATC TGTCAGTGTT 
CTGGCTGAAA AAGGTCCTTA CCCCGATAAA GTATACTATA ATGTAAGAAT GCAGAAGGAG 
ATAGGAATTA AAGATGTTAT TGAAGGAAAG ACTGATCTCT TCCTTGAAGG TGTTGAAACT 
CCTCTAATCA ACTCTTTATC TCCTGAAGAA CTGGACAAAT TGGAAATATA TTCTGTTCCA 
GCCCTGTCTT TTTCAATTCC ATTTAATCCC TATCCAAACA AGGCTCCCTA CACCCTTGAA 
AAAGATGGAG AAACATTCTT TAATCCTTTT GCTATCAAAA AGATCAGGTT TGCAATGAAT 
TTCTTAATTA ACAGGCAGTA TATTATTGAC GAAATCCTGG ACGGTGGCGG GGCCCCCATG 
TTTGACATGG CTACCCCTGG ACAGCCTGGT ACTTACAAGT ATAATCTGGT AAGTATTAAG 
AAAGGGTTTA CTCCGGAAGG TGATGAAGCA AAGGCCCTGG ATATGATTAA TGAAGCTATG 
AATAAGGCAG CTTCTTTACC TGAAAACGAG GGAAGGCTTA AAAAAGAGGG TAAATGA
 
Protein sequence
MRLFRVSLLV VLALLLSVSV LAEKGPYPDK VYYNVRMQKE IGIKDVIEGK TDLFLEGVET 
PLINSLSPEE LDKLEIYSVP ALSFSIPFNP YPNKAPYTLE KDGETFFNPF AIKKIRFAMN 
FLINRQYIID EILDGGGAPM FDMATPGQPG TYKYNLVSIK KGFTPEGDEA KALDMINEAM 
NKAASLPENE GRLKKEGK