| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_10370 |
|---|
| Symbol | |
|---|
| ID | 7314625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 1124759 |
|---|
| End bp | 1126051 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643611476 |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_002508788 |
|---|
| Protein GI | 220931880 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000128281 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTCA AAATAAAAAA GAGTAATCCC CTTAAGGGTG AAATAAATAT TCCAGGTGAT
AAATCTATCT CACATCGTTC GGTGATATTT ACCTCTCTTG CAGAAGGAAG AAGTTTAATC
AGGGGGTTTC TGGAAAGTGA GGACTGTTTA AATACCCTCA GGGCTTTCCA GATGATGGGA
GTTAATATTG AGAAGATAAA GCCTGGAGAA TATATAGTAA ATGGGGTTGG CCTTTATGGT
TTAAAAGAGC CTGGTGATGT CATTGACTGC GGTAATTCCG GAACTGGTAT GAGGCTTTTA
TGTGGTCTTC TGGCTCCCCA ACCTTTCTAT AGTGTGTTGA CAGGTGATAA CTCTCTTCGA
AATAGACCGA TGGGAAGAGT GGTAAACCCT TTAAGACAGA TGGGGGCCAG TATCTGGTGC
CGTGATGGGG GGTATGCCCC TTTAAGCATT AAGGGGGAGA AACTTGAGGG AATTTCCTAC
ACTTTACCGG TTGCCAGTGC TCAGGTAAAA TCCTCTCTGT TACTGGCAGG GTTGTATTCA
CAGGGAGATG TTTTTCTTAC CGAACCAGGT CCCTCCCGGG ACCATACCGA GAGAATGCTT
AAGGGTTTTG GTGTAAAAGT TTATAAAAAA GGTAATTCTA TAAAACTTCC CCATAGTGAG
GACACTAAAT TAACTCCCCA GGAGGTTTTA ATACCCGGTG ATATCTCTTC AGCTGCTTTT
TTTATTGTTG CTTCTTTAAT AACACCGGGC AGTGAGATTC TCCTTAAAAA TGTTGGTCTA
AACCCGACCA GATGTGGTAT AATTGATGTT GTAAGGCAGA TGGGAGGGAA CCTTGAATTG
TTAAATGTAA GAGAGGTTAA TGGGGAGAAA TCAGCTGATA TTTTAGTAAA ATATAGTGAG
TTAGAGGGTG TTCATATTGA TGGAGATATT ATACCGAGAC TTATAGATGA AATACCGGTT
ATCGCAGTTC TGGCGTCCCA GGCCCGTGGG GAAACAGTTA TTAGAGATGC TGCAGAATTA
AAGGTTAAAG AGACTGATAG AATCAAGGCT ACCGTTACTG AACTCGGTAA ATCAGGGGTT
GATATTGAAG AATTACCTGA TGGCATGGTT ATTAAAGGCC CCTGTTCTAT TATAGGGGGA
GTAAAATTAG AGAGCTATAA AGACCACAGA ATAGCCATGT CCCTGGCTGT AGCTGGACTG
TTAGCTGAAG AACAGATTAC TATTAAAAAT AGTGAGTGTA TTAACACATC TTTCCCGCAA
TTCAATAAAC TATTACAGAA ATTAATTCAA TAA
|
|---|
| Protein sequence | MELKIKKSNP LKGEINIPGD KSISHRSVIF TSLAEGRSLI RGFLESEDCL NTLRAFQMMG
VNIEKIKPGE YIVNGVGLYG LKEPGDVIDC GNSGTGMRLL CGLLAPQPFY SVLTGDNSLR
NRPMGRVVNP LRQMGASIWC RDGGYAPLSI KGEKLEGISY TLPVASAQVK SSLLLAGLYS
QGDVFLTEPG PSRDHTERML KGFGVKVYKK GNSIKLPHSE DTKLTPQEVL IPGDISSAAF
FIVASLITPG SEILLKNVGL NPTRCGIIDV VRQMGGNLEL LNVREVNGEK SADILVKYSE
LEGVHIDGDI IPRLIDEIPV IAVLASQARG ETVIRDAAEL KVKETDRIKA TVTELGKSGV
DIEELPDGMV IKGPCSIIGG VKLESYKDHR IAMSLAVAGL LAEEQITIKN SECINTSFPQ
FNKLLQKLIQ
|
|---|
| |