Gene Hore_10110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10110 
Symbol 
ID7314599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1100964 
End bp1101863 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content37% 
IMG OID643611450 
ProductdegV family protein 
Protein accessionYP_002508762 
Protein GI220931854 
COG category[S] Function unknown 
COG ID[COG1307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00762] EDD domain protein, DegV family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000366641 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTAG GAATACTAAC TGACAGCACA TGTGACCTCA GTGAAGATAT ATTAAAACAG 
CACAATATAG AGATGATCCC GCTTACAATA CATTTTGGTG AAGAGATTTT TAAAGAACGT
TATGAAATTA CCCCTGCTCA ATTCTTTGAA AGGCTGGAAA ATACTGAAAT AATATCAACT
ACGTCCCAGC CTTCCATTGG GTTGTTTGTG GACAAGTATA AAAAGATGGC TGAAGAGTAT
GACGCCATTA TCTCCATACA CCTTTCTTCC AAGTTCAGTG GTACGGTTGA ATCAGCCCGG
ATTGCTTCCC AGCAGGTTGA TGGTATTAAA ATTGAAGTTA TTGATTCTAA ATCAATTAGC
CTTGGACTCG GTTATCAGGC ACTACTGGCA GCCAAACTTA TTGAAGCTGG ATTCAGTTTT
AAAGAAATAG TGGACATGGT TAAAAAAGCC CGGGAGCATG TTGATATTTA TTTTACTGTT
AATGATTTAT CATATCTGGA AAAGGGTGGA CGTATAGGCA AAGCCCAGGC ATTTATTGGT
TCTATCCTTA ATGTTTATCC TCTTCTGGCT ATACCGGGGA CTGATGGAGA AATAATTCCT
CTGGAAAAGG TCAGGGGGAG TAAGCGTATT ATTAAAAAAC TGGTCAGTCG GGCTTTAGAT
TCTTTAAAAA ATGAAAAATA CGCCTGGATT GGTCTGGTTC ATGGGGCTGA CAAGGATTCC
TTTAACAAGT TAAATAAAAA TTTAACCAAT CAAAAATATA TTAAAGAAAG AGCTGACTTA
TATCAGATAG ATACTGGATG GATTAGCTCT ATTATAGGTT GTCATGCTGG TCCTTCAGTT
TACGGGATTG TTTTAATTAA AGGGGATATA TTAAATTATG AAGGAGAAAA TGCCCAGTAG
 
Protein sequence
MKVGILTDST CDLSEDILKQ HNIEMIPLTI HFGEEIFKER YEITPAQFFE RLENTEIIST 
TSQPSIGLFV DKYKKMAEEY DAIISIHLSS KFSGTVESAR IASQQVDGIK IEVIDSKSIS
LGLGYQALLA AKLIEAGFSF KEIVDMVKKA REHVDIYFTV NDLSYLEKGG RIGKAQAFIG
SILNVYPLLA IPGTDGEIIP LEKVRGSKRI IKKLVSRALD SLKNEKYAWI GLVHGADKDS
FNKLNKNLTN QKYIKERADL YQIDTGWISS IIGCHAGPSV YGIVLIKGDI LNYEGENAQ