Gene Hore_10020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10020 
Symbol 
ID7314590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp1093118 
End bp1093585 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content43% 
IMG OID643611441 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_002508753 
Protein GI220931845 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.808007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAGA CTTTTGAAGG AAAATTATTA GGTGAAGGAA TAAAGGTTGG AATTGTCGTC 
AGCAGGTTTA ATGAATTTAT TTCCAGTAAA CTTCTTGATG GAGCCCTGGA TGGATTAAGC 
CGCCATGGTG TTATCGATGA GGATATTGAT ATTGCCTGGG TTCCGGGTTC CTATGAGATA 
CCCCTGGTTG CCAAAAAAAT GGCTTTAAGG GGCAATTATG ACGGTGTTAT CTGCCTCGGG 
GCTGTTATTA GAGGCGAAAC CCCCCACTTT GAGTATGTTT CCTCTGAAGT AGCCAAGGGT 
GTGGCCAAGG TTGGTCTTGA TTGTGGGGTT CCTGTAATAT TCGGTGTATT GACAACTGAT 
ACTATAGAAC AGGCTATAGC CAGAGCGGGA ACAAAAGCTG GCAATAAAGG ATATGATGCA 
GCCTTGAGTC TGATTGAAAT GGTAAACCTG CTGGAAAATT TTAAATAA
 
Protein sequence
MGKTFEGKLL GEGIKVGIVV SRFNEFISSK LLDGALDGLS RHGVIDEDID IAWVPGSYEI 
PLVAKKMALR GNYDGVICLG AVIRGETPHF EYVSSEVAKG VAKVGLDCGV PVIFGVLTTD 
TIEQAIARAG TKAGNKGYDA ALSLIEMVNL LENFK