Gene Hore_09590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_09590 
Symbol 
ID7313452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1037398 
End bp1037817 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content32% 
IMG OID643611398 
ProductRbsD or FucU transport 
Protein accessionYP_002508710 
Protein GI220931802 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAGG GTGGGTTGAT TCATCCACAT ATATTAGAAA GTGTTGCAGC TGCTGGACAT 
GGTGCACAAA TATTAATAAC TGATGGAAAT TATCCAGCTT CTACTAAAAC AAAAGAAGAT
GTAAACAAAG TATATTTAAA TCTTGCTCCG GGGTTAGTTA ATGTTACTGA TGTACTTAAA
GTTTTAGTTG AAGTTATTAA TATAGAAGAG GCTACGGTAA TGGCACCATC AAAAGGAGAC
AAGCCAGCTA TATTTAAGGA ATTTAAAAGA ATATTAAGTT CTGGAACAGA TTTTAATGAA
ATTGGACGTT TTGAATTTTA CGACAAATGT GTATCTAATC AAGATCTATG CTTAGTCATT
GTTACAGGGG AACAGAGAAT ATATGCCAAT ATATTATTGA CAATTGGTGT AGTAAAATAA
 
Protein sequence
MVKGGLIHPH ILESVAAAGH GAQILITDGN YPASTKTKED VNKVYLNLAP GLVNVTDVLK 
VLVEVINIEE ATVMAPSKGD KPAIFKEFKR ILSSGTDFNE IGRFEFYDKC VSNQDLCLVI
VTGEQRIYAN ILLTIGVVK