Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_09500 |
Symbol | |
ID | 7313443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 1025774 |
End bp | 1026664 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643611389 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002508701 |
Protein GI | 220931793 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000000144721 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCTTG CAGATAGGTC AAAACGCCGA AAAATCTATT TGTTTCTGGC CTTTGTTGGT CCTATATTTG TGTTATATAC CTTATTTTTT ATCCTGCCCC TGTTTGAAGG GATATATTAT TCCTTTACTG ATTGGAAGGG GGTAGGGGGT AGTATAAACT GGGTTGGTTT TGATAATTAT ATAAACCTGT TTAAGATAGA TGATGTGTTT ATAAATTCCA TAAATACAAC TTTTTATATT GCTTTTGTTA ATGTTTTATT AACAAATATC CTGGCTATGA TTTTTGCCAT TGCTTTAACT AATAATTTTA AACTAAATAA TCTATACAGG GGGATAATAC TCCTTCCCAA CATGATTAGT ATGGTTGTTT CGGGTTTTAT CTGGAAATTT ATGTTTTCTA AAATATCAGG GAGCTTATAT GAGGCCACAG GAATTGAATT GTTCAATAAT AGTTGGCTTG GAGATATTGA GATTGTTATC TATTCAGTGG TAATTGTTAG CCTGTGGCAG GGACTGGGAT ACATAATGAC CATTTATATT GCGGCCCTGC AGGGTGTTGA TGAAAATGTT ATTGAGGCTG CTTCAATAGA TGGTGCAAAT TCATGGCAGA TATTCTTTAA AATAAAACTG CCATTAATGC TTCCCATTGT ATCTATTGGT GCCTTTCTCA ATATATCAAT GTCTCTTAAA ATATTTGATA TAATATATTC TTTGACCGGG GGTGGACCAG GCCATGCTTC TGAAGTAGCC ATGTTAAATA TTTATCGGGA GGCTTTTGTC TTTAACCGAC TGGGTTATGC CAATGCAAAA GCGATAGTTT TAACAATTAT AATTGTAATT ATTACTGTAA TTCACTTCCG TATTACTTCC CGGGAGGAGG TAAAGATATG A
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Protein sequence | MFLADRSKRR KIYLFLAFVG PIFVLYTLFF ILPLFEGIYY SFTDWKGVGG SINWVGFDNY INLFKIDDVF INSINTTFYI AFVNVLLTNI LAMIFAIALT NNFKLNNLYR GIILLPNMIS MVVSGFIWKF MFSKISGSLY EATGIELFNN SWLGDIEIVI YSVVIVSLWQ GLGYIMTIYI AALQGVDENV IEAASIDGAN SWQIFFKIKL PLMLPIVSIG AFLNISMSLK IFDIIYSLTG GGPGHASEVA MLNIYREAFV FNRLGYANAK AIVLTIIIVI ITVIHFRITS REEVKI
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