Gene Hore_08620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08620 
Symbol 
ID7314849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp928572 
End bp929495 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content36% 
IMG OID643611292 
Productpredicted permease, DMT superfamily 
Protein accessionYP_002508613 
Protein GI220931705 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAATA AATATTTGCC CGTTATTTCC GGAATAACAT TCTCGACAAT TTTTGGGTTT 
TCTTTTATGT TTACAAAAGA AGCCCTGGAT ATAATTTCCC CCTTTCAACT GCTTGGATAC
AGGTTTGCAA CTGCCGCCCT GGTTTTAACC CTTTTATATG TGACAGGATT GATAAAAATA
AATCTAAAAG GAAAAAAACT GGGACTATTA TTCACTCTGG CGTTGATTCA GCCTGTCTTA
TATTTTGTCT TTGAAACCCT GGGAATTCAT TTGACTACAT CATCGGAAGC GGGATTAATG
ATTTCTTTGA TTCCCGTTGT TGTTGCCATT TTAGCCTCAA TTTTTCTAAA GGAAAAACCT
AACCGGGTTC AGTTATTTTT TATTATCCTT TCAGTGGTCG GGGTGGCTTT TATCATGGTA
ATGAAGGGGG CACTGTCAGT AGAAAAGAAT TATTTTGGCA TTTTCCTTTT ACTGGGTGCT
GTTTCCATGG CAGGTATATA TAATATATTA TCAAGGAAAT TATCCTTAAA TTTTAAACCG
GTGGAAATAA CATTTGTTAT GATGTGGTTC GGTGCTATTT TTTTTAATAT TATCAGTTTC
TGGCAAATCA GGGGTAACTG GAAAATCTAT TTTGGGATAA TACTCAGACC ACATGTATTA
ACGTCAGTCA TGTATCTTGG TATATTATCT TCTGTTGTAG CTTTTTTCCT GGTTAATTTT
ACCCTTTCCC GGATCCAGTC ATTTCAATCA GCTGTCTTTT CCAATTTGAC AACCGTTATT
TCCGTTATGG CCGGGATAAT TTTTAGAAAT GAACCTTTTT ACTGGTTTCA GATAATAGGA
GCTGTTATGA TTATAACTGG GGTTTGGGGT ACCAACTATT ATGGTAGAAA TTTAAAAAAG
AAGGCCGAGG AGCTGCCCGC TTAA
 
Protein sequence
MPNKYLPVIS GITFSTIFGF SFMFTKEALD IISPFQLLGY RFATAALVLT LLYVTGLIKI 
NLKGKKLGLL FTLALIQPVL YFVFETLGIH LTTSSEAGLM ISLIPVVVAI LASIFLKEKP
NRVQLFFIIL SVVGVAFIMV MKGALSVEKN YFGIFLLLGA VSMAGIYNIL SRKLSLNFKP
VEITFVMMWF GAIFFNIISF WQIRGNWKIY FGIILRPHVL TSVMYLGILS SVVAFFLVNF
TLSRIQSFQS AVFSNLTTVI SVMAGIIFRN EPFYWFQIIG AVMIITGVWG TNYYGRNLKK
KAEELPA