Gene Hore_07840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_07840 
Symbol 
ID7314771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp842211 
End bp844271 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content40% 
IMG OID643611215 
Producttranslation initiation factor IF-2 
Protein accessionYP_002508536 
Protein GI220931628 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA TTAGAGTTTA TAAACTGGCA AAGGAATTAG GTAAATCCAG TAAAGAACTG 
GTTAATATTT TAAATGATTT AGGTGTTGAA GTATCCAGTC ATATGAGTAC AGTAGAGGAT
GAGACGGCTG AACTTGTTAA GGGAATGTTA CAGGAAGAAG ATAAACCTGA AGAAAAAATT
AGTAAAAAAG AGCCAGATAA GAAAGATAGA AAGAAGACTA AAGGAAAAAA ACAGATGACC
AGAACAGCCA CTCAAAAAGA AGGTACAGAA CATGGTCAGA AAGATACAGA TAGAAGAGAG
ATGAGGGTAA CTGTAAACCC TCCCCTGTCT GTAAAAGAGC TGGCTGAGAA GGCTGATATT
CCTGTTAATC GTATAATTAA AACATTAATT GGACTGGGGG TTATGGCTAC AGTTAATCAT
CAGATTGACG AAGAAATAGT TAAAAAACTA ATAGACAAAA TGAACTTAAA AATAAAAATT
TCTCAAGGGG AAGATAAAGA AGAAAAACCG GATAAAGTTC AGACTGATAT AAAAGATAAA
CCTGAAGATT TAGAACTTCG CCCTCCTATT GTCACTGTAA TGGGACATGT TGATCATGGA
AAAACAACCC TTCTTGATGT AATCAGGGAA ACCCGGGTTG CTGAAAGTGA GGCAGGAGGA
ATTACCCAGC ATATAGGAGC TTATCAGGCA GTTGTACAGA ATAAGAAGAT TACATTTATA
GATACCCCCG GTCATGAGGC TTTTACTGCA ATGAGGGCCA GGGGAGCCAG GTTGACCGAT
ATTGCTATTT TAGTTGTTGC AGCTGATGAT GGGGTTATGC CCCAGACTGT AGAAGCTATA
AATCATGCCA AGGCCGCTGA TATCCCGATA ATTGTTGCTA TAAATAAGGT GGATAAATCC
AATGCCCAGC CTGATATGGT AAAACAGCAG TTAACAGAGC ATGGTCTGGT ACCCGAAGAC
TGGGGTGGAG ATACTATCTG TGTTCCCATT TCTGCTTTAA AGAAAAAGAA TATAGATGAA
TTACTTGAAA TGGTTCTTCT TGTAGCTGAA ATGGAAGAAC TTAAGGCAAA TCCCGATAGA
CCAGCAGAAG GTGTTATTGT AGAATCTCAG CTGGATAAAG GACGGGGCCC GGTTGCCACA
GTACTTGTAA AAAATGGAAC CTTAAAGGTC GGTGATCCAA TCCTGGCCGG TTATACTCAT
GGTAAGGTCA GGGCCATGAT AAATGATCAG GGAAAACGTA TTAAAGAGGC ACTGCCGTCG
ACACCGGTTG AAGTTCTGGG CTTTTCTGAT GTGCCGGCAG CTGGTGATTA TGTTCAGGTT
CTCGAAGATG AAAAAGAGGC CCGGGCTATT GCAGAAGAAA GATTACAGAA AAAGCAGGAA
CGTGATTTAC AGCATGACGG GCGTATTTCC CTCGATGGTT TATATCAACA GATAAAAGAG
GGAGGAGTTA AGGAGCTTAA TTTAATAATC AAGGGAGATG TTCATGGTTC TATTGAGGCG
TTACGTGAAT CCCTTGTAAA ATTAAGTACT GATGAGGTTA CGGTCAATAT TATTCATACA
GGGGTCGGTG CTATTAACGA AACAGATGTT AACCTGGCCA GTGCTTCAAA TGCAATTATA
ATTGGTTTTA ATGTCAGGCC TGATTCCAAT GCCAGAAAAT TGGCTGAACG GGAAAAAGTT
GAGATAAAAA CCTACCGGGT TATTTACAAG ATAATTGAAG ACCTTAAAGA TGCTATGGCC
GGTATGCTTG AACCTGAACT TAAAGAAGAA GTTACCGGAA GGGCTGAAGT CAGAGCTACA
TTTAAGGTGC CCAATGTTGG AACCGTAGCC GGGCTTTATG TTAAAGAAGG GTTTATCAAT
CGAAATAATA AAGTGCGTTT ATTGAGGGAT GGCGTAGTCG TCTATGAAGG TGATATTGCT
TCCCTGAAAA GATTTAAAAA TGATGTCAGG GAAGTTAAAG AAGGTTATGA ATGTGGTCTG
GGAATTGAAG GTTATAATGA TATTAAAGAA GGGGACCAGA TTGAAACCTA TACCTATAGG
GAAATAAAAC GCACCTTATA G
 
Protein sequence
MSKIRVYKLA KELGKSSKEL VNILNDLGVE VSSHMSTVED ETAELVKGML QEEDKPEEKI 
SKKEPDKKDR KKTKGKKQMT RTATQKEGTE HGQKDTDRRE MRVTVNPPLS VKELAEKADI
PVNRIIKTLI GLGVMATVNH QIDEEIVKKL IDKMNLKIKI SQGEDKEEKP DKVQTDIKDK
PEDLELRPPI VTVMGHVDHG KTTLLDVIRE TRVAESEAGG ITQHIGAYQA VVQNKKITFI
DTPGHEAFTA MRARGARLTD IAILVVAADD GVMPQTVEAI NHAKAADIPI IVAINKVDKS
NAQPDMVKQQ LTEHGLVPED WGGDTICVPI SALKKKNIDE LLEMVLLVAE MEELKANPDR
PAEGVIVESQ LDKGRGPVAT VLVKNGTLKV GDPILAGYTH GKVRAMINDQ GKRIKEALPS
TPVEVLGFSD VPAAGDYVQV LEDEKEARAI AEERLQKKQE RDLQHDGRIS LDGLYQQIKE
GGVKELNLII KGDVHGSIEA LRESLVKLST DEVTVNIIHT GVGAINETDV NLASASNAII
IGFNVRPDSN ARKLAEREKV EIKTYRVIYK IIEDLKDAMA GMLEPELKEE VTGRAEVRAT
FKVPNVGTVA GLYVKEGFIN RNNKVRLLRD GVVVYEGDIA SLKRFKNDVR EVKEGYECGL
GIEGYNDIKE GDQIETYTYR EIKRTL