Gene Hore_06640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06640 
Symbol 
ID7314570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp719316 
End bp720125 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content34% 
IMG OID643611095 
Producttranscriptional regulator, TrmB 
Protein accessionYP_002508416 
Protein GI220931508 
COG category[K] Transcription 
COG ID[COG1378] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.22042e-16 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTA GTAAAGAGGA AGTCATTAAA AATCTGGTAG GTATCGGTTT TAATCAGTAT 
GAAGCCAAGA CCTATGTTGC TTTATTACAG AACCCCAATA GTACCGCATA TGAGTTAAGC
AAGAACTCGG GTGTTCCCCA GTCCAAGGTC TATGAAACTA TTAAAAACCT TGTGTCCAAA
GGTTTAGCAG TTGCAGAGGG TCAAAGACCT GTAAAATATT CACCCCTTCC CATAGAAGAA
TTTTTGGAAA GATATAAAAA ATCTGTAGAA GAGTCTGTTT CTTTTCTAAA GAAAAATTTA
AAAGACATAA ATGATCAACC ACAGATAGAT TATATGTGGC ATTTTGAAGG TAGGGACAGG
ATACTTAACA AAGTTTCCAG TATGATTAAT AATGCAGAAA AAAACCTCTA TTTTGAAATA
TGGATTGATG AACTTGAAAT TCTCTGTGAT GATCTTATAA AGGCCGAAGA CCGGGGTGTG
GATATTGTAC TGGTTCAGTA TGGTCATAAT AACAGCTGTG ATATAGGCAA GGTATATTAT
CATCAGATGG ATGGAATGGA AAAAGATGCA GAAAGAGTAG GGAGATGGTT AACCGTTATT
AAGGATGCCA GAGAATCTCT CTTTGGTATT TTTAAAGAAG ACAATAATTA TGCTATATGG
ACCCAGAATA AAAGTTTTAT GCTTATGGCT GAAAGTTTTA TTTCACATGA TATCTATATA
GCAGAAATGT ATAGTAAATA TAAAGACCTG ATTGAACAGG AATTTGGACC CAATTTTAAA
AAGTTAAGGG ATATTATTTC AATAGGTTAA
 
Protein sequence
MAASKEEVIK NLVGIGFNQY EAKTYVALLQ NPNSTAYELS KNSGVPQSKV YETIKNLVSK 
GLAVAEGQRP VKYSPLPIEE FLERYKKSVE ESVSFLKKNL KDINDQPQID YMWHFEGRDR
ILNKVSSMIN NAEKNLYFEI WIDELEILCD DLIKAEDRGV DIVLVQYGHN NSCDIGKVYY
HQMDGMEKDA ERVGRWLTVI KDARESLFGI FKEDNNYAIW TQNKSFMLMA ESFISHDIYI
AEMYSKYKDL IEQEFGPNFK KLRDIISIG