Gene Hore_06120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06120 
Symbol 
ID7314517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp666516 
End bp667613 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content40% 
IMG OID643611042 
Product3-dehydroquinate synthase 
Protein accessionYP_002508364 
Protein GI220931456 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACTTTA AATCAATTGA AGTCAATATA CCTTCAAAGA CAGTAAATTA TTCTATAATT 
ATTGGACAAG GACTGATGGA GAATGCTGGT TCCTTAATTA AGGATGTTTA CCGGGGAAGG 
AAAATTATGG TGGTAACTGA TGAAAATGTG GATGGGTTAT ATGGTGACAT CATGTTAAAG 
TCACTGGAAA AAGAAGGGTT TGTTGTTATC AAATATATAA TTCCGCCTGG GGAAAAGTCA 
AAGAGCAATT ATTATCTTCA TAAGGGTTAT GATATCATGG TTGAAAATGG ATTTGGAAGG 
GATCATCTGG TAGTAGCCTT CGGTGGAGGC GTAGTCGGTG ATCTGGCCGG TTATCTGGCT 
GCAACATACA TGAGGGGGAT TGGCCTGGTA CAGATACCGA CTACACTGCT GTCCCAGGTT 
GATAGCAGTG TTGGTGGAAA GACAGCGATA AACCATCCAG CCGGTAAAAA CCTGATCGGT 
GCTTTTTATC AACCGGACAG GGTTATTATA GATGTCGGGG TCCTGAAATC ACTGGAAAAG 
AGGGAATTGC GGGCCGGGAT GGCCGAGGTT ATAAAATATG GTTTGATATT CGACAGTGAT 
TTTGTAGATT ACCTCCGGAA TAATTATCAG GAGGTATTTG TTTATAATCC CCGTGTTCTG 
GGGAGGATAA TTGAACAGTC ATGTAATTAT AAAGCCAGGA TAGTGGAAGA AGATCAAAAA 
GAAAAGGGTA TCAGGGCCCT GTTGAATTTT GGTCATACTA TTGGCCATTC CCTGGAGGCT 
GTAACCGGGT ATAGAAAGTA TAAACATGGT GAAGCTGTGG CCATTGGAAT GGTGGGGGCA 
GCCCGGTTGT CAGAAAGGTT GGAGTTGCTT CAGGAAGGTG AGGCAGATAA GGTTGCAGAA 
ATTTTAAGAT TATATGGATT ACCCCTTTCC TATCAGTATG GTGAAGACCC TGAGATGGTT 
TATAAAACCC TTTTTTATGA TAAAAAAGTA AAAGATAATA AATTGACCTG GATTTTACTC 
AAAAATATAG GTAAAGGCTT TATTAAAAAT GATGTAAATG ATAATATAAT TAATGAGGTA 
CTGGAGGGGT TAAAGTGA
 
Protein sequence
MDFKSIEVNI PSKTVNYSII IGQGLMENAG SLIKDVYRGR KIMVVTDENV DGLYGDIMLK 
SLEKEGFVVI KYIIPPGEKS KSNYYLHKGY DIMVENGFGR DHLVVAFGGG VVGDLAGYLA 
ATYMRGIGLV QIPTTLLSQV DSSVGGKTAI NHPAGKNLIG AFYQPDRVII DVGVLKSLEK 
RELRAGMAEV IKYGLIFDSD FVDYLRNNYQ EVFVYNPRVL GRIIEQSCNY KARIVEEDQK 
EKGIRALLNF GHTIGHSLEA VTGYRKYKHG EAVAIGMVGA ARLSERLELL QEGEADKVAE 
ILRLYGLPLS YQYGEDPEMV YKTLFYDKKV KDNKLTWILL KNIGKGFIKN DVNDNIINEV 
LEGLK