| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05410 |
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| Symbol | |
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| ID | 7313505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 587398 |
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| End bp | 589026 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643610964 |
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| Product | Sodium:solute symporter |
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| Protein accession | YP_002508294 |
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| Protein GI | 220931386 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000184365 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATGGT ACTATCTTAT TCCGTTAGTC TATTTATTTT TACTACTGGT TGTTGGTTTT
GTTATAGCTA AAAGACAGGA AACCCGGTCA GATTTTTATG TTGCCTCAAA TAAAATGGAT
GGATCAGTCC TCTTTGCTAC AGTTATGTCC ACAGTGGTTG GCGCAAATAC ATATATGGGT
TTTAGTGGCT TGATTTATAA TGGTGGACTT CATTTTATGT GGATGCTCAG TGGTGCCGGT
CTTGCTTATT TTATCCTCTT CTTTATATCA GGTAAAATAA GGAAAATAGC CACAAAATAC
GAAGTATTCA CTCTTCCTGA CCTGGTAGAG CTTAGATATT CTAATCCTGT TGCCCTACTA
ACTACTTTCT TTTCCCTTAT TGGGCTAGTT GGAGGTATCG GAGGTGGTCT TCTCGGTTTA
GGAGTTATAC TTAATTCTTT ACTGGGAATA CCCACCACTA CTGCTATAAT TGTTACTTCC
ATTATTACTA TCATTTATAC CTGTCTTGGA GGTTTATGGG GAGTATCCCT GACAGACTGG
ATTCAATCTA TTATTATGAT TGCTGGTGTA GCAGTCTGTA TAGTATTTGG GATAACCTCT
GTAACACCGG GACAATCATT TGTCAATGGT GCCTTCGAAA TAGTAAATGT ATTAAAACAA
CAATTAGGAA CAGAACTGGT TAGCCCCTTT GCCGGTTTAA CCTTTTTTAT GGCTCTGGCC
TGGACCATTA CCTTTATGCC CCTTAATACT ATCTCTCAGA CCCAGATCCA GAGGGTTTAT
GCAGCAAAAA ATGTAAAGAC TATTCGTGGT GTCAGTTTAC TAATGATTAT TTTTGTAGCT
ATGGTCCTCA CTTTCGGTTT AGCCTTTATC GGAATTCTTG GAAGAGTTGC TTTACCCGGT
TTAAAAAATG CTGAGGCAGT CTTCCCCCAG ATGAGCATGA AAGTTATCAA CCCTGCATTA
GGTATTTTAA TTGTAACGGG AATTATGGGA GCTGCTATGT CTACAGTAGA TTCAAACCTT
CTCGGTTCCG CCATGCATGT CACCCGTGAC CTATATGAAC GGTACATGAG ATATAAGAAT
AAGTCTGTTG ATGAAAAGCG TATTTTATTT ATCAGTCGGG TAACCATTGT TATTATTGGT
GTAATTAGTA CTATAGCTGC TCTATTCACT CCTTCTATAA TGAGCCTACT ACTGATAACA
ATGAAGATAT TTGCCGGAGC TACTTTTGCC CCTGTACTTA TCGGTCTTTA CTGGAAAAGA
GCCAATGCTT TCGGGGCTTT ACTGGGTGAA ATTCTTGGAG GTATGGCTGT TGTTATTAAT
ATTATTCACC CCGTTGTCAA CCTGGATCCT GTCATATTTG GAATTATTAT GGCAGTTTTA
GGAACGATAA CTGGCAGCTT ATTTACCAAA GAAAATACAG AAAAAGGCAG TATTTTTTCT
TTTGCTAATG ATATTTCATC AAAAGGATGG CTCGCAGTTA TAGCTATTGC TCTTCTCTAT
TTTGGATGGG TTATAAGTAT GAACAACTAC GCCATGTGGC CGTATTTCAT TATAACTACT
GTAGTATTAC TGGTTTTATC AGTTGTCTTC CTTATTTATA GTTTTATCAC TGAAAGAACC
GGCAATTAA
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| Protein sequence | MEWYYLIPLV YLFLLLVVGF VIAKRQETRS DFYVASNKMD GSVLFATVMS TVVGANTYMG
FSGLIYNGGL HFMWMLSGAG LAYFILFFIS GKIRKIATKY EVFTLPDLVE LRYSNPVALL
TTFFSLIGLV GGIGGGLLGL GVILNSLLGI PTTTAIIVTS IITIIYTCLG GLWGVSLTDW
IQSIIMIAGV AVCIVFGITS VTPGQSFVNG AFEIVNVLKQ QLGTELVSPF AGLTFFMALA
WTITFMPLNT ISQTQIQRVY AAKNVKTIRG VSLLMIIFVA MVLTFGLAFI GILGRVALPG
LKNAEAVFPQ MSMKVINPAL GILIVTGIMG AAMSTVDSNL LGSAMHVTRD LYERYMRYKN
KSVDEKRILF ISRVTIVIIG VISTIAALFT PSIMSLLLIT MKIFAGATFA PVLIGLYWKR
ANAFGALLGE ILGGMAVVIN IIHPVVNLDP VIFGIIMAVL GTITGSLFTK ENTEKGSIFS
FANDISSKGW LAVIAIALLY FGWVISMNNY AMWPYFIITT VVLLVLSVVF LIYSFITERT
GN
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