Gene Hore_05130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05130 
Symbol 
ID7314023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp560037 
End bp561044 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content46% 
IMG OID643610936 
Productuncharacterized membrane protein 
Protein accessionYP_002508266 
Protein GI220931358 
COG category[S] Function unknown 
COG ID[COG3949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGGAG CCGGTTTTGC TTCAGGTCAG GAGGTCCTTC AGTTTTTTGG TTTTTATGGT 
CTCGGGGGAT TTGGCGGCCT GGTTTTAACG ATTATGTTAT TTGTTATTTA TGGATATATC
ATCTTAAGCC TGGGCAGGGA ATACAGGGCC CGTTCTCATC TTGAGGTGAT TCGTTATGCC
GGGGGCCGGT GGTTGAGTAA AGTTATTGAT GGGGTTATTA CTTTTTTTCT CTTTGGTGCT
TTAACAGCAA TGGTGGCCGG GTCAGGGGCT ATTTTCCTGG AGCAGTTTGG TATTCCTTCC
CTGTGGGGGA ATATTGCTAT GATCGGAGCC TCAATACTGA CAACTTTATT CGGAATTGGC
GGAGTTATTT CTGCCATTAG TTTTGTAGTT CCCCTGCTTT TAACAGGTGT TTTTCTGGCT
ACCATAGCAT CAGTTATAGG GGCTTTACCG GTAAACATAG CTGACCTCCA TCAGGCTCTT
CCGGGGAGGG CTCCGGTGCC ACACTGGGCT TTATCCTCAG TTGTTTATGC ATCCTATAAT
ATTGTACTTG CTGTAGCAGT TCTGGCTCCC CTCGGGAGCA GGGTAAATGA TAAGAGAAAG
CTAAAGTATG GTGCTATTTT TGGTGGAGTG GGTTTAGGAC TGGGGGCCAT GTTTATCCTT
TTAGCGATAC TGCTTAATAT ACCCCGGGTA TTGGAATATG AGATTCCCAT GATTTATGTA
GCCGGTAATT TTGCTCCCTG GTTTCAGCTC GTTTACAGTG GTATCTTACT GGCAGAGATT
TATACTACTG CGGTAGGTAA CCTTTATGGT TTTGTAGCCC GCCTTACCGA TCCAGAAGGT
AAGAAATACC GGACATACAT TATTTTAACC GGGGTTGCTG CATTTATAAC CAGTCAGCTT
GGTTTTTCCA ACCTGGTACG CTACCTCTAC CCGGCAGTAG GTTATGCTGG TTTACTCCTG
CTGGGAGGTT TAACACTGGG GATGTACCGG CGGGTCCGGA ACAGATAA
 
Protein sequence
MVGAGFASGQ EVLQFFGFYG LGGFGGLVLT IMLFVIYGYI ILSLGREYRA RSHLEVIRYA 
GGRWLSKVID GVITFFLFGA LTAMVAGSGA IFLEQFGIPS LWGNIAMIGA SILTTLFGIG
GVISAISFVV PLLLTGVFLA TIASVIGALP VNIADLHQAL PGRAPVPHWA LSSVVYASYN
IVLAVAVLAP LGSRVNDKRK LKYGAIFGGV GLGLGAMFIL LAILLNIPRV LEYEIPMIYV
AGNFAPWFQL VYSGILLAEI YTTAVGNLYG FVARLTDPEG KKYRTYIILT GVAAFITSQL
GFSNLVRYLY PAVGYAGLLL LGGLTLGMYR RVRNR