Gene Hore_04370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04370 
Symbol 
ID7314416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp470161 
End bp471018 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content37% 
IMG OID643610860 
ProductdegV family protein 
Protein accessionYP_002508190 
Protein GI220931282 
COG category[S] Function unknown 
COG ID[COG1307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00762] EDD domain protein, DegV family 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTA AAATCATTGT TGATAGTGCC TGTGATCTTC CAGATGAAAT CCTGGATAAA 
TATGAAATTG AAGTATTGCC CTTTAATATT CATATTGATA ACCAATGTTA TAAAGATGGT
ATTGATATAG AGGTTGAAGA GCTTTATGCT GCTATGAAAG AGGGGAAAGT GCCTAAAACA
TCCCAGGTTA GTCCCGAAGA TTTTAAAAGA GCTTTTAGCA GGAATGCAGA GGCAGGTAAT
GATTGTATTT ATATAAGCTT TTCCGCGAAA CTTTCCGGAG CCAATCAGAC AGGACAGTTG
GTAGCAAAAG AAATCAGGGA TAAATATAAA GATGTTAATA TAGATATTGT GGATAGCAAA
GCAGGTTCAG TAGCAACCGG TATTATTGCC TATAAAGCAG CTCTTTTGCT TGAAAAGGGA
GTCAGTAGAG AAAAGGTGAT AGAAAAGATT AAATACTGGG CAGATCATAT TGAGCACATA
TTTATGCTCG ATGATTTAAA ACCCCTGGTA AGGGGTGGAA GGATTAGTAA AACTAAATTC
TTTGTCGGAA ACATACTTAA TATCAAGCCT ATTTTATGTG TTAAAAACGG AAAAATAGAG
TTATTGAAAA AAGTCCGTGG CACCGGAAGG GCCATAAGTA AGATGATTAA TTATGTAAAA
GAGAAAAGTT ATGATCTAAC AGAGCAACTA ATAGGAATTG CCCATGCTGA TGATTTAGTT
CAGGCTGAAG TGTTGAAAGA AAAGATAGAG GAGCTTGGGG GAAAAATCTT CTGTGTGGAG
AAAATTGGAA GTGTGCTGGG AGTTCATCTT GGTATCGGGG GAATTGGTGT CTTCTTTTTA
AATGAGGCCG AAGCCTGA
 
Protein sequence
MSTKIIVDSA CDLPDEILDK YEIEVLPFNI HIDNQCYKDG IDIEVEELYA AMKEGKVPKT 
SQVSPEDFKR AFSRNAEAGN DCIYISFSAK LSGANQTGQL VAKEIRDKYK DVNIDIVDSK
AGSVATGIIA YKAALLLEKG VSREKVIEKI KYWADHIEHI FMLDDLKPLV RGGRISKTKF
FVGNILNIKP ILCVKNGKIE LLKKVRGTGR AISKMINYVK EKSYDLTEQL IGIAHADDLV
QAEVLKEKIE ELGGKIFCVE KIGSVLGVHL GIGGIGVFFL NEAEA