| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_03410 |
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| Symbol | |
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| ID | 7314729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 354672 |
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| End bp | 355613 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643610766 |
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| Product | DNA polymerase LigD polymerase domain protein |
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| Protein accession | YP_002508097 |
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| Protein GI | 220931189 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCTTA CCATCGGTAA ACACGATGTT CAATTAACCA ATCTTGATAA GGTCCTATGG
CCTGAACTGG GTTATACTAA AGGTGATTTG ATTAATTACT ATATAAATAT GTATCCCTAT
CTTAAAGAAT ACCTCTTAAA CCGCCCCCTG TCCATGAAAA GTTACCCGGA TGGAATTAAC
GGTAAATCAT TTTATCAGAA AGACTGCCCC GATTATGCCC CCCACTGGCT ATCCACTTAT
GGTATTTTCT CGGGCCATCG AAAGGATATA ATAAACTGGG TTACTATAAA CAAACTATCA
GACCTTGTCT GGGTTGCTAA CCGGGCCTCA ATAGAACTAC ATACCTGGTT TTCAACTACC
ACTAACCTTG ATAAACCTGA TTTTGCTGTA TTTGACCTGG ATCCCGGATC TAAATCATCT
ATGAAAGATG TAGTTGATAT CGCCCTGACC ATTAAAAATA TCCTGGATGA ATTTAATGTC
AGGTCATTTG TGAAAACCTC TGGCAAGAGG GGACTTCATG TTTATATTCC TGTTAAAACA
AGATACACTT ATAAAGAAAT AAGAAGCTTC CTGCAAAATG TAGCGGAAAT GGTAATCAAA
TTAAAACCAG AACAGGCTAC TGTAGAATGG AGAAAAAATA AGAGGCAGGG TAAGGTTTAT
ATAGATTACC GACAGAACGG TAAATCCAAA ACCCTTCCTG CCCCTTATTC TTTAAGGCCC
ACCAGTAAGG CCACCGTCTC TACCCCTCTA AAATGGTCAG AAATAACCCC GGATCTCAAT
CCAGATAATT ACAATATTAA AAATATTGAA ACTAGAATCA AACAGAAGGG TAACATCTGG
GAAACCCTTT TAAAAATACG CCAGGAACTA CCCGGTCTTT TTCTTGGTCT TCTTCTTTTT
CTTTCCTTCT CCCTCTTCGG TGGCCTCAAC ACTTTTCTTT AG
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| Protein sequence | MKLTIGKHDV QLTNLDKVLW PELGYTKGDL INYYINMYPY LKEYLLNRPL SMKSYPDGIN
GKSFYQKDCP DYAPHWLSTY GIFSGHRKDI INWVTINKLS DLVWVANRAS IELHTWFSTT
TNLDKPDFAV FDLDPGSKSS MKDVVDIALT IKNILDEFNV RSFVKTSGKR GLHVYIPVKT
RYTYKEIRSF LQNVAEMVIK LKPEQATVEW RKNKRQGKVY IDYRQNGKSK TLPAPYSLRP
TSKATVSTPL KWSEITPDLN PDNYNIKNIE TRIKQKGNIW ETLLKIRQEL PGLFLGLLLF
LSFSLFGGLN TFL
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