Gene Hore_03330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03330 
Symbol 
ID7314719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp343130 
End bp344266 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content36% 
IMG OID643610756 
ProductABC transporter related 
Protein accessionYP_002508089 
Protein GI220931181 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGG TTACTCTTAA AGATGTAAGG AAGGTCTATA AGAGTCAGAA TGAAGAGGTT 
TTAGCAGTTA AAGACCTGAG CCTTGAAATA AGAGATGGGG AATTTATGTG TTTTCTTGGC
CCTTCCGGGT GTGGTAAAAC TTCAACATTG CGAATGATTG TAGGATTAGA AGAAATAACA
AATGGGGAAA TATATATCGG GGATAGGATC GTTAATGACT TAACACCACA GGAACGAAAT
GTTGCTATGT CCTTTGAGAC TTATGCCTTA TATACCCATT TAACTGTTAA AGAAAATTTA
TTATTTCCGC TAAAGGCAAG GGGTCTGAAT AAATCGGATC AACAGCGGCG CCTCAGAAAA
GTTGTAGATA TGCTGGAAAT CAAAGATATT CTAGACAGGA GTCCAAGTAG TTTAAGCGGT
GGACAGCAGC AGCGTGTTTC CCTGGGGAGG GCATTAATAA GACAGCCAGA TGTCTTCTTA
CTTGATGAAC CACTATCACA CCTGGATGTA AGTTTGAGAA TTTCTACCCG TTCTCGAATT
AAAAGGCTTC ATAATCAATT AAGCACTACA ATGATATATG TTACCCACGA CCAGTTAGAA
GCAATTTCTT TAGCAGATCG TATCGCTGTT ATGAATTTTG CTGAGTTACA ACAGGTTGGA
ACAAGGGAAG AATTATTGGA TCGTCCTAAA AATATATTTG TCGCCGATTT TATAGGTGAA
CCCCCAATTA ATTTTGTCAA TTGTAAACTG GATAAGAATG ATGATAAATT TGTACTCAGG
TTTAAAAACT CTCATTATAC TATAGAATTA CCAGAAAAGT TAGAAAAAGT AATTAAAAAA
GAATACATTG AAGATGTTAT TCTTGGTATC AGGCCACATG ATATTTTGTT TAGAGAGAAA
AAAGGGTATG TAGGCCTTGA AAATGGAACT GTTGAAATAT TTGAATTTCT TGGAGAAGAA
AATCATGTAA CTGTTAATAT TGGTGGTGAG AGTATTACAG TAGTTACTGA TGCTAAAGAT
TACTTTAAAG AAGGAGAAAA AGTTGACCTT TATCTTTCCC AGGATAAAAT TCATCTTTTT
GACCCCGAAA CTGAAGAATG CCTGACTACC CGTTATAAAA ATCAGGGTTT AATATAA
 
Protein sequence
MAEVTLKDVR KVYKSQNEEV LAVKDLSLEI RDGEFMCFLG PSGCGKTSTL RMIVGLEEIT 
NGEIYIGDRI VNDLTPQERN VAMSFETYAL YTHLTVKENL LFPLKARGLN KSDQQRRLRK
VVDMLEIKDI LDRSPSSLSG GQQQRVSLGR ALIRQPDVFL LDEPLSHLDV SLRISTRSRI
KRLHNQLSTT MIYVTHDQLE AISLADRIAV MNFAELQQVG TREELLDRPK NIFVADFIGE
PPINFVNCKL DKNDDKFVLR FKNSHYTIEL PEKLEKVIKK EYIEDVILGI RPHDILFREK
KGYVGLENGT VEIFEFLGEE NHVTVNIGGE SITVVTDAKD YFKEGEKVDL YLSQDKIHLF
DPETEECLTT RYKNQGLI