| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_02970 |
|---|
| Symbol | |
|---|
| ID | 7314683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 306160 |
|---|
| End bp | 307386 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643610720 |
|---|
| Product | NADH dehydrogenase I subunit F |
|---|
| Protein accession | YP_002508053 |
|---|
| Protein GI | 220931145 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA GACTTTTTTT AAAGCAAAAT GAAGTCAGTG ATTTTGATAG TTATAAGTTT
CCGGCCCTGA AAAGGGCCCT GGACATGGAT AAAAAGGATA TTATTGAGGA ACTTAAGAAA
TCAGGTCTCA GAGGAAGAGG AGGGGCTGGC TTTCCAACCG GGTTGAAGTG GGAATTAGCC
TTAAAGGAAA AAGCTGGAGA GAAATATATA ATCTGTAATG GTGATGAAGG AGAACCTGGT
ACTTTTAAAG ATCGATATTT ACTAGAAAAT AGTCCCTTGA AGGTACTGGA GGGAATATTA
ATCGGTGCCT ATACCATTGG TGCTCATCAG GGGTATATTT ATATCCGGGG GGAATATGCT
TTACCCATTA ATATATTTAG ACAGGTAATT AAGGAAGCAA AGAAAAGAGG TATTCTGGGT
AATAGGGTAA TGGGTAGTGA TTATAGTTTT GATCTCAAGC TAATTAAAGG AGCCGGGGCC
TATGTATGTG GTGATGAAAC TTCATTAATT AATTCCATAG AAGGAAAACG TGGTACCTCC
AGGATTAAGC CACCTTATCC AACCCGGCAG GGTTTATTTA ATAAACCAAC AGTTGTTAAT
AATGTTGAAA CTCTGGCAGC AGCTGCTGAA ATAATTCTAC AGGGGGCTGA TAAATATGGT
TCAATGGGAA CAGAACAGAG TAGAGGGACC AAACTGGTCT GTTTGAGTGG TGATATATGT
AATCCGGGTG TCTATGAAGT GGAATTTGGT ACTATGACCA TAAAAGAATT AATCGATACC
TTTGGTGGTG GTGTTAAATG TAGTAGTGGG CTTAAATTTG TAATCCCCGG GGGAATCTCA
ACATCAGTCC TGAAAGATGA TGAACTGGAT ATTCCCTACA CTTATGAGGA CATTGAAAAA
AAGGGGAGTT CTCTGGGATC TGGAGCTGTG GTGGTAGTGA GTGAAGACCA TTACCTGCCG
GATTTAATGT TAAATGTATC CCGGTTTTTT ATGGATGAGA CCTGTGGGAC CTGTTTTCCC
TGTAGAGAAG GTAATAGGAG GGTTCATCTG CTATTAAAAA ATAAAATCAG TGATGGCCGA
TTTGACCGGG ATGAAAAGAA ATTAATATCT GATATTGGTA GGGCTATTCA TCTGGCTGCT
AGATGTGGCC TCGGACAGAC TTCATTAAAT TTTGTAACTT CAGTTTTAAA TAAATTTGAA
GATGAATTAA TGGTCGGGAG GGATTAG
|
|---|
| Protein sequence | MTERLFLKQN EVSDFDSYKF PALKRALDMD KKDIIEELKK SGLRGRGGAG FPTGLKWELA
LKEKAGEKYI ICNGDEGEPG TFKDRYLLEN SPLKVLEGIL IGAYTIGAHQ GYIYIRGEYA
LPINIFRQVI KEAKKRGILG NRVMGSDYSF DLKLIKGAGA YVCGDETSLI NSIEGKRGTS
RIKPPYPTRQ GLFNKPTVVN NVETLAAAAE IILQGADKYG SMGTEQSRGT KLVCLSGDIC
NPGVYEVEFG TMTIKELIDT FGGGVKCSSG LKFVIPGGIS TSVLKDDELD IPYTYEDIEK
KGSSLGSGAV VVVSEDHYLP DLMLNVSRFF MDETCGTCFP CREGNRRVHL LLKNKISDGR
FDRDEKKLIS DIGRAIHLAA RCGLGQTSLN FVTSVLNKFE DELMVGRD
|
|---|
| |