Gene Hoch_6856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6856 
Symbol 
ID8549275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9391172 
End bp9392113 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content74% 
IMG OID646391516 
ProductDNA methylase N-4/N-6 domain protein 
Protein accessionYP_003271213 
Protein GI262200004 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0555121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAAGC GTCCACCGCA GCGGCAACCG GCGCTCGAGG CGCTGCCCGT GCCCGATGAT 
CTCGCCCACC CCGGCGGCAT GACGCTCGCG TATCGCAGCG ATGGCGGCGC GCTGTGGCTG
GCCGACGCGC TGGCCCTGCT CGGCAGCCTC GACGACGGCA GCGTCGACCT GGTGGTCGCC
GACCCGCCGT ACGGAATCGC CAAGGAGCGC TGGGACGACT TCGCCTCGCT CGAGGCCTAC
GTCGACTGGT GCGACGCCTG GCTGGCCGAG GTCGCGCGCG TGCTCAGCCC CGCGGGCTCG
GCGTATGTGT GCGGCTTCTC CGAGATCCTG GCCGAGGTCA AAGCGCGCTC GGCGCGGCGC
TTCGCGGGCG GCTGCCGGTG GCTGATCTGG TACTACCGCA ACAAGGCCAA CCTGGGCAGC
GACTGGGGCC GCTCGCACGA GTCCATCCTG CACCTGCGCA AGCAGCGCCG CCTGCGCCTC
GATATCGACG CCGTGCGCGT GCCCTATAAC GACCACACCC GCAAATATCC CGAGCGCGTG
CAGGCCGAGT CCTCGCAGTA CGGCCAGGGC CGCCGGCGCG ATCGCTGGCA GCCGCATCCG
CTCGGCGCCA AGCCGCGCGA CGTGTTCGAG ATCCCGGTGC TGTGCAACGG CATGGCCGAG
AAGACCGCGC ACTCGACGCA GAAGCCCGAG GAGCTGGTGC GCCGCTTCAT CGCCGGCACC
ACCTCGCCGG GCGCGCTGGT GCTCGACCCC TTCGCCGGCT CCGGGACCAC GGCCGTGGTC
GCCCAGCGCC TGGGCCGCCG CTGGATCGCG GGCGACAGCG ACGCCCGCTA CGTCGGCCTG
GCGCGCGAGC GCCTGCGCGA TGCCGCCGCC AGCGCCGCGC CCGACGGCGA CGGCGACGGC
GACGGCGGCG ACGCCGATGC CGATAGCGAC AGCGCGACCT GA
 
Protein sequence
MPKRPPQRQP ALEALPVPDD LAHPGGMTLA YRSDGGALWL ADALALLGSL DDGSVDLVVA 
DPPYGIAKER WDDFASLEAY VDWCDAWLAE VARVLSPAGS AYVCGFSEIL AEVKARSARR
FAGGCRWLIW YYRNKANLGS DWGRSHESIL HLRKQRRLRL DIDAVRVPYN DHTRKYPERV
QAESSQYGQG RRRDRWQPHP LGAKPRDVFE IPVLCNGMAE KTAHSTQKPE ELVRRFIAGT
TSPGALVLDP FAGSGTTAVV AQRLGRRWIA GDSDARYVGL ARERLRDAAA SAAPDGDGDG
DGGDADADSD SAT