| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6664 |
|---|
| Symbol | |
|---|
| ID | 8549081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 9135773 |
|---|
| End bp | 9137131 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646391324 |
|---|
| Product | peptidase M16 domain protein |
|---|
| Protein accession | YP_003271023 |
|---|
| Protein GI | 262199814 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCC TATCTGTATT GGCGCTCGGC GCCGCCCTGC TCCTGCCCGG CGCGGCACTG
GCCGAGGACA CGTCGCCGGG CCAGGACGCG CTGGCCACGA TGTTCCCCTT CCCGGTGCAT
CAGGAGACCC TCGACAACGG CCTGCAGGTC ATCGTCGTGC CCATGGAGAG CGATGAGCTG
GTGGCCGTGC GCATGGCCGT GCGCACCGGC GCGCGCGACG AGTACGAGCC CGGGCGCACC
GGCTTCGCGC ACTTCTTCGA GCACATGATG TTCCGCGGCA CCGAGAAGTA CCCGGCCGAG
GTGTACAACA AGCTGATCAC GCAGATGGGC GCCGACACCA ACGCCTACAC CTCGGACGAC
GTGACCGTGT ACCAGCTCAA CGTGGTCGCC GACGACCTCG CCCAGGTCAT GGAGCTCGAG
AGCGACCGCT TCAAGAACCT GTCGTATCCG CCGCAGGCCT TCGAGACCGA GGCCGGCGCG
GTCTACGGCG AGTATCGCAA GAACCGCACC AGCCCGTTCT TCACCCTCTA CGAGGCCATG
CGCAAGGCCG CGTATACCGT CCACACGTAC GGACACACCG CGATGGGCTA CGAGGCCGAC
ATCAAGAACA TGCCCAAGAT GTTCGACTAC TCGCGCACCT TCTTCTCGCG CTACTACCGC
CCGGACAACG CGATCCTGGT GGTCGCCGGC GACGTCGAGC CGCAGGCCAC CATCGCCATG
GCTCGCAAAT ACTACGGCGA CTGGGAGCGC GGCTACGTCA AGCCCAAGGT CAAGCCCGAG
CCCGAGCAGA AGCAGGAGCG CCGCATCGAG GTGAGCTACG AGGGCCGCAG CCTGCCGCTC
GTGGCCATCG CCTACAAGAG CGACGCCTAC TCGCCCAGCG ACCGCATCTA CGCCGCCTCG
CACGTGCTGG CCTCGCTGGC CTTTGGCGAG ACCAGCGACA TCTACCGCCA GCTCATCATC
GAGCAGCAGG CGGTGCAGTT CCTCGAGGCC GAGGCCTCCG ATTCGCGCGA CCCGGGCCTG
TGGGGCATCT GGACCATGGT CAAGGACCCG AGCAAGGTCG ACGAGGTTAT CGGACAGATC
GACGAGACCG TGGCCCGCTT CCGCAATGAG GCGCCCGACG CCGAGCGCCT CGAGGCGGTC
AAGTCGAACC TGCGCTACTC GCTGCTCATG GAGCTCGACT CGCCGGCCGC GGTGGCCGGA
ACCGTCGCGC ACCAGGCCGG CGTCGCCGGC AGCCTCGAGA ACGTCGCCCT GTTCCTGCAA
ACCCTCACCG AGGTGACTCC CGAGGACGTG CGCGCCGCCG CGCAGAAGTA CCTCGCCCCC
GAGCGCCGCA CCATCGCCAT CCTGCGGGAG AAGAACTGA
|
|---|
| Protein sequence | MKSLSVLALG AALLLPGAAL AEDTSPGQDA LATMFPFPVH QETLDNGLQV IVVPMESDEL
VAVRMAVRTG ARDEYEPGRT GFAHFFEHMM FRGTEKYPAE VYNKLITQMG ADTNAYTSDD
VTVYQLNVVA DDLAQVMELE SDRFKNLSYP PQAFETEAGA VYGEYRKNRT SPFFTLYEAM
RKAAYTVHTY GHTAMGYEAD IKNMPKMFDY SRTFFSRYYR PDNAILVVAG DVEPQATIAM
ARKYYGDWER GYVKPKVKPE PEQKQERRIE VSYEGRSLPL VAIAYKSDAY SPSDRIYAAS
HVLASLAFGE TSDIYRQLII EQQAVQFLEA EASDSRDPGL WGIWTMVKDP SKVDEVIGQI
DETVARFRNE APDAERLEAV KSNLRYSLLM ELDSPAAVAG TVAHQAGVAG SLENVALFLQ
TLTEVTPEDV RAAAQKYLAP ERRTIAILRE KN
|
|---|
| |