Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6626 |
Symbol | |
ID | 8549043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 9082757 |
End bp | 9083662 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646391286 |
Product | hypothetical protein |
Protein accession | YP_003270985 |
Protein GI | 262199776 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00022098 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAACGA AACTGCTGCT TGCCACGCTT GGTCTCGCCT TGTTCTCCCA GGGTTGCGTC ATCGTCGATG ACAACGATCC GCCGCCGCCG GCTCCCTCGC CGACGCCGAC CCCGACGCCG ACGCCGACGC CGACGCCGAC GCCGACCCCG CCCGACGGCA CCCTGACGGT CGAGAACCTG TCGGACTACT CTCTGTTCGA GATCTACATT TCCCCCGCGG AAGCCAGCAA CTGGGGGCCG GACCTGCTCG GCTCTTACGA GGAGCTGTTC CCCAATGAGA GCTTCACCGT CGACGTCGAC TGCGGCTACT ACGACGCCCA GATCGTCGAC GAGTACGGCA CCATCTGCGA GGTCTACGAC CTCGACATCT GCTACGAGGA CGCCGCCTGG GTGATCGACA ACGCCCTGCT GGCCGACTGC GACGGCTTCG GGCTCAACCC GACCTTCACC GTCCAGAACG AGTCATCGTA CACCATCACC GAGCTGTACG TGTCGACCTC GGATAGCTCC AACTGGGGGC CGGATCAGCT CGGCAGCGAT TATCTCTACC CGAACGAGAG CTACACCATC GAGCTGTACT GCGACGTGTA CGACGTCCAG ATCGTCCAGG AGGACGGGCT CATCTGCGAG CTGTACGAGC TCGACCTGTG TGACCAGGAC GCCACCTGGT ACGTCACCAA CGCGGTCATC GAGGACGCTG ACTGCTTCTA CAACGCGGCC GACGCCAACG TCGTGTACGA GAGCAAAGAC GCGCTCCAGG CCTCGCCCGA GCTGGGCATT CTCGGCCAGT CCCTGGGCGG CGGCGAGAAG GCCAAGCGGC CCGCGAAGCT GCTCGAGCGC GAGCTCGACA CCAGCGTGAA GCTGGGCGGT GGTGCCAAGT CCGACGCTGC CGGCGCCGCG CTGTAA
|
Protein sequence | MKTKLLLATL GLALFSQGCV IVDDNDPPPP APSPTPTPTP TPTPTPTPTP PDGTLTVENL SDYSLFEIYI SPAEASNWGP DLLGSYEELF PNESFTVDVD CGYYDAQIVD EYGTICEVYD LDICYEDAAW VIDNALLADC DGFGLNPTFT VQNESSYTIT ELYVSTSDSS NWGPDQLGSD YLYPNESYTI ELYCDVYDVQ IVQEDGLICE LYELDLCDQD ATWYVTNAVI EDADCFYNAA DANVVYESKD ALQASPELGI LGQSLGGGEK AKRPAKLLER ELDTSVKLGG GAKSDAAGAA L
|
| |