Gene Hoch_6583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6583 
Symbol 
ID8549000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9032165 
End bp9032878 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content65% 
IMG OID646391243 
Producthypothetical protein 
Protein accessionYP_003270942 
Protein GI262199733 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.286525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTG CTCAAGCTCG TCCCATTCCC GGCGCCGTCG CCACCGCCGG TGTCAACGAA 
CGCGTCACCT TCCTGCGCAA GACCTACGCG CACCTCGGCG GCGCCATCCT CGCCTTCGTC
GCGCTCACCG CGCTCATCGT CAACAGCTCC CTGGGAACAG CGCTGTTCCA CTGGGCGATG
GGCTCGCGCC TCAACTGGTT CCTGCTGCTC GGCCTGTTCA TGTTCGCGGG CTGGGTGTCC
GAGCGCTGGG CGCGCTCGGA TACCTCGCGC GGCAAGCAGT ATCTGGGTCT CGGCCTGTAC
ATCGTAGCGG AGGCGATCAT CTTCACCCCG CTGCTGTACA TCGCGTCTAC CTTCGATCGC
TTCGAGAACG TGATCCCGCA GGCCGGCCTG GCCACGGTGG TGCTCTTCGC CGGGCTCACG
GCCACGGTGT TTCTCACCAA GAAAGACTTC TCCTTCCTGC GCGGCGCGCT CACGATCGGC
GCCTTCGCCG CTCTCGCCCT CATCGGCCTG TCCCTGCTCT TCGGCTTCGA GCTGGGCATC
CTGTTCGTGG TCGGCATGCT CGTCCTGGCC ACGGGCTACG TCCTCTTCTA CACCTCGCGC
GTCCTCGCCT ACTACCCGCC GACGCAGTAC GTATCTGCGT CGCTGGCGCT GTTTGCGTCC
ATCGCGCTGC TGTTCTTCTA CATCCTGCAG CTCTTCATGT CGCTGCGCGA TTGA
 
Protein sequence
MSFAQARPIP GAVATAGVNE RVTFLRKTYA HLGGAILAFV ALTALIVNSS LGTALFHWAM 
GSRLNWFLLL GLFMFAGWVS ERWARSDTSR GKQYLGLGLY IVAEAIIFTP LLYIASTFDR
FENVIPQAGL ATVVLFAGLT ATVFLTKKDF SFLRGALTIG AFAALALIGL SLLFGFELGI
LFVVGMLVLA TGYVLFYTSR VLAYYPPTQY VSASLALFAS IALLFFYILQ LFMSLRD