| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6554 |
|---|
| Symbol | |
|---|
| ID | 8548971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 8998721 |
|---|
| End bp | 8999398 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646391216 |
|---|
| Product | maleylacetoacetate isomerase |
|---|
| Protein accession | YP_003270915 |
|---|
| Protein GI | 262199706 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | [TIGR01262] maleylacetoacetate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.150841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.274829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCC TGTACGCGTA CTGGCGCAGC TCGTGTAGCT GGCGCGTGCG TCTGGCCCTG
GCCATCAAAG AGGTCGAGCA CGTCGTGGTT CCCGTCCACC TGGTCAAAGA CGGCGGCGAG
CAGCACGGGG GCGCGTACAT AGCCAAGAAC CCGATGGCCC AGGTGCCGCT GCTCGAGATC
GACGAGGCTC CGCTCGGCAG CCCGCTGGGC GAGGGCAGCA CGGTGCACCG CATCGCCCAG
TCGATGGCCA TCCTGGCCTT TCTCGAGGAG CGGTATCCCG AGCCGGCGCT GCTGCCCGAG
GACATCTACG CCCGCGCCCG CGCGCGCGAG CTGGCCGAGC TGGTCAGCTC GGGCATCCAG
CCGCTGCAGA ACCTGGGCGT GCTCCAGCAC CTCTCGGAGC AGCTCGGCCA GGACAGCAAA
GCCTGGTCGC AGCGCTGGAT CATGCGCGGC CTGGTGGCCT TTGAGGAGGC CTCGCGCGGG
CTGCGCGGGC GCTACTCGGT CGGCGACGAG CTGAGCTGGG CCGACCTGTG CCTGATCCCG
CAGATGTACA ACGCGCGCCG CTTTGGCGTC GATCTTACGC GCGTGCCCGC GCTGGTGGAC
ATCGAGCGCC GCTGCGCCGA GCTGCCCGCC TTCCAGCGCG CGCATCCCGA CGCCCAGCCC
GACGCGCCCG CGTCGTAG
|
|---|
| Protein sequence | MMRLYAYWRS SCSWRVRLAL AIKEVEHVVV PVHLVKDGGE QHGGAYIAKN PMAQVPLLEI
DEAPLGSPLG EGSTVHRIAQ SMAILAFLEE RYPEPALLPE DIYARARARE LAELVSSGIQ
PLQNLGVLQH LSEQLGQDSK AWSQRWIMRG LVAFEEASRG LRGRYSVGDE LSWADLCLIP
QMYNARRFGV DLTRVPALVD IERRCAELPA FQRAHPDAQP DAPAS
|
|---|
| |