Gene Hoch_6536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6536 
Symbol 
ID8548953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8969840 
End bp8970715 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content70% 
IMG OID646391199 
Producthypothetical protein 
Protein accessionYP_003270898 
Protein GI262199689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCG CCATGCGCAG CCCCCTCTTC GTCGCCGGCG TCGCCTTTGC GTCGCTGGGA 
CTCGTGTCCA CGGCGGCCGC CCAGAGCCAG CCCGAGCCCT CGCTGCAAGC CCAGGCCGCG
GAGTCATCGA CGCCCGCGCT GAGCGGCGGA GCCCTGTTCG GCGTCGCCTT CACCGACATC
AGCGGCGAGT TCGGCGTGTC CGCCGGTTCT GCCGACGACC CCGACATGCA GCTGGTGTCG
GCGACCAAGG CGCCGGTGAC CACGCAGGGC CTGTCGCTGG GCGCGTACCT CAGCGCGCAG
CTCGCGCCGC GCTGGGGCGT CCGCGCCGAG CTGCGCTACT CGCAGCGGGG CGCGCGCGCG
TCGAGGGAGC TGTCCAGCTT CGGCGGCTCG GAAGAGGATT TCGAGATCCC CTACGACATC
ACCTTCGACC TCGCCTACCT CGAGCTGCCG CTGCTGGTGA CCTACGCGAT CCCCTACGCC
AACGGCTTCA CGCCCTACCT GTTCGCCGGT CCCGATCTCG CGCTGCTGCT CACGGCCGAC
GTCGATGTCG AGGTCAGCCT GCCGGCGCGC GATCCCATGG ATCCCAGCGT CATCACCCTC
GAGCAGAGCA CGGCCACCGA GGATGTATCG GAGCTCATCG CCGGCTTCGA TGTCGGCGCC
ACCCTGGGCG CGGGCATGAA GTTTCCGCTG TCGCGCGGGC ATTTCATTCT CGATGCGCGC
GCGACCCTGG CGATCACGCA GACCGCGGGC GGCGGCCAGG TGGACATCAC CATCCCCACC
GGCGCGGACT CGATGAGCGG AGATCTCGCC GTCGCGCTGC AGCCCCGCAA CATGCGCCAT
CGACTGTTCA TGCTGACAGC CGGCTACGAG TTCTAG
 
Protein sequence
MLGAMRSPLF VAGVAFASLG LVSTAAAQSQ PEPSLQAQAA ESSTPALSGG ALFGVAFTDI 
SGEFGVSAGS ADDPDMQLVS ATKAPVTTQG LSLGAYLSAQ LAPRWGVRAE LRYSQRGARA
SRELSSFGGS EEDFEIPYDI TFDLAYLELP LLVTYAIPYA NGFTPYLFAG PDLALLLTAD
VDVEVSLPAR DPMDPSVITL EQSTATEDVS ELIAGFDVGA TLGAGMKFPL SRGHFILDAR
ATLAITQTAG GGQVDITIPT GADSMSGDLA VALQPRNMRH RLFMLTAGYE F