| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6441 |
|---|
| Symbol | |
|---|
| ID | 8548856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 8839414 |
|---|
| End bp | 8840982 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646391102 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003270803 |
|---|
| Protein GI | 262199594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC AAGATCACCG GAAGGCGCCG CTCGATAGCA GAGCGCGCGC GCGGAAGCCG
AGCTGGAACG TGCCGCCGCA GTTGACCGCG TTGGCGCTGG TCGCATGGGT GGCGCTCGCT
GGCGGCTGCA GGGACAGGGA CAGGGACAGG GACAGGGACG CACCGCCGCA GTCCGAGAAG
GTACAGGCGT CCGAGAACGC CGCAGCGATG CCGTCCGCCC CTGAGAATAC CGCGGCCGCG
GCACAAGCAC AGGCCGCAGC CGCGGCATCG GCCCAGGCCG CGGCCGACGA CCTCGATGCG
CGCATCGAGA CCGCGCTGCT GCGCGGCGCC TCGTATCTGG TCTCGCGCCA GGCCGCCGAC
GGCGCGTTCC GCTCGACCGA GGACGAGGCC CTGAGCAACG GGTACTCGCT GACCCCGCCC
GTGGTGCTGG CGCTGTGGGG GGCGACCCGG GGCGGCCAGG GCGCGACCGC GACCGCGAGC
GTGGCCGACA AAGCGCGCGC GCGCGGGGCC GGGTTTCTGG CCACCATCAT CACGCCCGAG
GGCGTGATTC GCACCGGCGA CGATGCGCCG CGCTTTCCCT ATCATGCCGC CGCGGGCGCG
CTGCTGGTGT TGAGTATGCA CGGCGCCCCG GAGCACGCCG AGGTGCGCGG CGCGCTGGTC
GCGTACCTGC TCGGCCTGCA GCTCACCGAG ACCCACGGCT ACCCGAGCAA TCACCCCTCG
TACGGCGGCT GGGGCTACAA CACGGCCATC CCCGAGTTCG AGGACGGGCA CGCCGAAGTG
CAGGTGAGCG CCAACCTGGC GATCACCGAG TACATCGTCG GCGCGCTGCG CATGAGCGGC
GTCGCGGCCG ACCATCCCGC CATGCAGAAG GCCGAGGTCT TCGTCTCGCG CTGTCAGAAC
TTCACCTCGC TGCCCGAGGG CGAGGGCGCG CCGGGCACCC CGGAGGTGAC CACGACCGAC
TGGGACGACG GCGGCTTCTT CCAGTCGCGC TCCGGACCCG ACAGCAACCT CGCCGGTGTC
GGCGGCATGG ACGTGCTCGG CCGCACGCGC TATCGCTCCT ACGGCTCGGC CACGGCCGAC
GGCCTGCGCA CGCTGCTGCA GCTCGGCTTC GGCGGCGACG ACCCGCGGGT CGCGGCCGCC
ACGCGCTGGC TGCTGCGCAA CTTCTCGGCC GTGCGCAACG CGGGCGCGTT TCCGCCCGAG
CTCGAAGTCC GGCGCGCGGC CTATCACTAC TACTACGCTC ACTCCGTGGC CCACGCCATG
CGCGCCATCG GCGCCGCCGA GATCGATATC GCCAGCGCCG AGCTGGTCGC CGCCGAGCAG
CCGCCCACCG ATGCCGAGAC CGCGGCCGAG GAGCCCGCCG CGACCCGGCG CGTGCACTGG
GCCGAGGCGC TGGCCGAAGC CCTGCTGGCG CGCCAGGACA AGGACGGCGC GTGGCGCAAC
CAGCACATCG AGGCGCGCGA GGACGACCCG CTGGTGGCCA CGCCCTACGC GCTCTCGGCC
CTGGCCATCG CGCGCATGGC GCTCACGGGC GAATCTCGGA CACACCGTCC AGATCAGGTG
CGGCTGTGA
|
|---|
| Protein sequence | MKRQDHRKAP LDSRARARKP SWNVPPQLTA LALVAWVALA GGCRDRDRDR DRDAPPQSEK
VQASENAAAM PSAPENTAAA AQAQAAAAAS AQAAADDLDA RIETALLRGA SYLVSRQAAD
GAFRSTEDEA LSNGYSLTPP VVLALWGATR GGQGATATAS VADKARARGA GFLATIITPE
GVIRTGDDAP RFPYHAAAGA LLVLSMHGAP EHAEVRGALV AYLLGLQLTE THGYPSNHPS
YGGWGYNTAI PEFEDGHAEV QVSANLAITE YIVGALRMSG VAADHPAMQK AEVFVSRCQN
FTSLPEGEGA PGTPEVTTTD WDDGGFFQSR SGPDSNLAGV GGMDVLGRTR YRSYGSATAD
GLRTLLQLGF GGDDPRVAAA TRWLLRNFSA VRNAGAFPPE LEVRRAAYHY YYAHSVAHAM
RAIGAAEIDI ASAELVAAEQ PPTDAETAAE EPAATRRVHW AEALAEALLA RQDKDGAWRN
QHIEAREDDP LVATPYALSA LAIARMALTG ESRTHRPDQV RL
|
|---|
| |