Gene Hoch_6429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6429 
Symbol 
ID8548844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8819027 
End bp8820004 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID646391090 
ProductStearoyl-CoA 9-desaturase 
Protein accessionYP_003270791 
Protein GI262199582 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG CCCCTCCCAC CATCCCTGTC TCAACGCCGA ACAGTGGCGA CTACAGCGTT 
CGCTGGCTGC AGAGCATTCC GTTCTGGGCC GTTCACGTGG CCGCCGTCGT CGGCGTCATC
TGGCTCGGCT GGTCCTGGTC CGGCCTGGCC CTGGCCCTGG GCCTGTACTT CGTGCGCATG
TTCGGCATCA CCGGCGGCTA CCACCGCTAC TTCTCCCACC GCTCGTACAA GACCGGTCGC
GTGATGCAGT TCCTGCTCGC GCTGCTCGGC GGTCTCAGCA CCCAGAAAGG CGTGCTGTGG
TGGGCCGCTC ATCACCGCAA CCACCACAAG TACTCGGACC AGCCCGAGGA CGTGCACTCG
CCCCGGCAGC GCGGCTTCTA CTGGTCGCAC ATGGGCTGGA TCCTGGTAAA GAAGCACGAG
GTCATCCACT GGGACCGCAT CCCCGATCTC GCCAAGTACC CCGAGCTGCG CTTCCTCACC
CGCTACGACC AGTACATCGC GGTCGCGTTC GCGGTGCTGC TGTTCGCGCT GGGCGGCGCC
TGGGCCCTGG TCTGGGGCTA CTTCGTGTCC ACCGTGCTGC TGTGGCACGG CACCTTCACG
ATCAACTCGT TCTCGCACAT CTTCGGTCGC CGCCGTTACG ACACCGACGA TGACAGCCGC
AACAACTGGC TCCTCGCGAT CATCACCCTG GGCGAGGGCT GGCACAACAA CCATCACTAC
TACCAGCGCT CGGTGCGCCA GGGCTTCTAC TGGTGGGAGA TCGACATCAC CTACTACGTG
CTCGTGGCGC TGTCGTGGCT GGGCCTGGTG AGCGACCTGC AAGGCGTGCC CGAGCATGTC
CGCGACCCCG AGGCGGCGCG CGAGCGTCTG GCTCGCAAGG CCGCGCGCGC GGCCGAAGCC
AAGTCCGCCG GGGACCTCGA CGACGGCGAC CTGCCGCCGA CGGGCGACGA TCCCGCGAGC
GAGCACCTGC CCGCCTGA
 
Protein sequence
MATAPPTIPV STPNSGDYSV RWLQSIPFWA VHVAAVVGVI WLGWSWSGLA LALGLYFVRM 
FGITGGYHRY FSHRSYKTGR VMQFLLALLG GLSTQKGVLW WAAHHRNHHK YSDQPEDVHS
PRQRGFYWSH MGWILVKKHE VIHWDRIPDL AKYPELRFLT RYDQYIAVAF AVLLFALGGA
WALVWGYFVS TVLLWHGTFT INSFSHIFGR RRYDTDDDSR NNWLLAIITL GEGWHNNHHY
YQRSVRQGFY WWEIDITYYV LVALSWLGLV SDLQGVPEHV RDPEAARERL ARKAARAAEA
KSAGDLDDGD LPPTGDDPAS EHLPA