6 homologs were found in PanDaTox collection
for query gene Hoch_6042 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_6042  ribosomal large subunit pseudouridine synthase B  100 
 
 
228 aa  423  1e-117  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4604  hypothetical protein  41.94 
 
 
274 aa  89  5e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.469215  normal 
 
 
-
 
NC_007796  Mhun_1291  mucin 2, intestinal/tracheal  40.57 
 
 
2353 aa  60.5  0.00000002  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.62338 
 
 
-
 
NC_006274  BCZK0459  internalin protein  30.97 
 
 
1112 aa  43.5  0.003  Bacillus cereus E33L  Bacteria  normal  0.695574  n/a   
 
 
-
 
NC_005945  BAS0520  internalin  30.97 
 
 
1070 aa  42  0.008  Bacillus anthracis str. Sterne  Bacteria  normal  0.753967  n/a   
 
 
-
 
NC_007530  GBAA_0552  internalin  30.97 
 
 
1070 aa  42  0.008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.166539  n/a   
 
 
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