Gene Hoch_5685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5685 
Symbol 
ID8548099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7799912 
End bp7800862 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content74% 
IMG OID646390353 
Producthypothetical protein 
Protein accessionYP_003270055 
Protein GI262198846 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0513542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCG TAGACACCAT CCCGCTCACG GTCTGCGCCC GCGACGAGGA GCGCTCGATC 
GGCGCCTGCC TCGACGCTCT GCTCGCCGCC CGCGACTACG CCGAGGCCCG GTTGCCCGTA
GAGATCGACC TCTTGGTCGT CCTCGACCAG TGCCGCGACC GCACCGAGGC CGAGGTCCGT
CGCCGCGGCG TCGCCTGCGC CCACAGCCGC GGCGGCAAGG TCGAGGCCCA GCGCCGCGGC
GCCCGCAGCG GCCGCTTTCA GATCTTCTGC GACGCCGACG TCGCGGTCTC GCCCGAGGCC
CTGCACGCGC TGTGCGCGGT CATGCTCGCC GACGAGCGCG TGCTGGTCGC GTTTCCGCCC
AAGCGTCCGA TACCGCCGCG CCGGCGCACG CCGCTGGCCC GCGCGCTGCA CGTCTACAAC
CTGCGCCGCG GCTTCTCCTC GCAGCGCACC TGGTTCAACG GCAAGCTGTT CGCCATCCGC
GACTGGCAGG TGCCCACCCG CGACGAGGTC GCGCAACGCG CCCGCGCGCT GCCGCCGAGC
CGCTTCTACG ACTACGCCGC CGGCATGCGC GTGGACGATA TCTATCTCAG CCGCCGCGTG
CTGGCCGCCG GCGGCCCCGA GGCCCTGCAC GAGACCGCGA CTGGCCTGGT GCGCTTCCGC
GCGCCCGAGA CCTGGCTGGG CATGTATCGC TACTACCGGC GCATGCGCAT GGAGCTCGAG
CGCCTCGACG CGCTGTTCCC CGAGACCCGG GCCGTGCACG CCCGCTACGG CGTGCGTCGT
CCCGATCTGC TGGCGCGCGC GCCGCGTCGC GAGCGCTGCG CCTGGCACCT GTTCCGCGCC
GCGCTGCTCA CCTGCCGCGC CGCCTATCGC GCCGAGCGCG CTTTTTACGA ACACCTGAGC
CCGCGCCCCT TGCAGCCGTG GCCGGCGATT CCCGAGACCA AGGGCCTGTG A
 
Protein sequence
MLPVDTIPLT VCARDEERSI GACLDALLAA RDYAEARLPV EIDLLVVLDQ CRDRTEAEVR 
RRGVACAHSR GGKVEAQRRG ARSGRFQIFC DADVAVSPEA LHALCAVMLA DERVLVAFPP
KRPIPPRRRT PLARALHVYN LRRGFSSQRT WFNGKLFAIR DWQVPTRDEV AQRARALPPS
RFYDYAAGMR VDDIYLSRRV LAAGGPEALH ETATGLVRFR APETWLGMYR YYRRMRMELE
RLDALFPETR AVHARYGVRR PDLLARAPRR ERCAWHLFRA ALLTCRAAYR AERAFYEHLS
PRPLQPWPAI PETKGL