| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5592 |
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| Symbol | |
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| ID | 8548006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7676631 |
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| End bp | 7677227 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646390265 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_003269967 |
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| Protein GI | 262198758 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.352235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCA AGAGCGCCGA ATTCGTCACC TCTGCGGCCA AGCCGTCGCA GTTCCCCGCC
CCGACCTTGC CCGAGATCGC GTTTGCCGGT CGCTCCAACG TCGGCAAATC CTCGCTGATC
AACACGCTGG TCGATATCGC CGGCCTGGCG CGCACCTCGC GCACGCCCGG GCGCACGCGC
CTGGTCAACT GGTTCCAGAT CGTGCCCGCC AAGGGCAAGC CCATGCTGTT TGTCGATCTG
CCCGGCTACG GCTACGCCAA GGTGCCCACT GCCATGCGCG CGTCGTGGCG TCCGCTGATC
GAGGACTATC TGAGCGACCG CGCAACGCTG CGCGCGCTGG TGGTGCTCAT CGACGCCCGC
CGCGGCGCCC AGGAGGAAGA GATCGATCTG CTCGACTGGC TGCGCAGCGC CGAGGTCCCG
GCCATCACCG TGGTCACCAA AGCCGACAAG CTGTCCAAGA ACAAGCGCAA GCCGGCGGCG
GCCGAGATCC AGCGCGATCT CGGCCTGCGG CGGCCGCCGA TTCTGTTCTC GAGCCTCAGC
GGCGACGGTC TCAACGATCT CTGGCAGGCC ATCGCCCGCA AGGTCTCCGC CCGCTAG
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| Protein sequence | MKPKSAEFVT SAAKPSQFPA PTLPEIAFAG RSNVGKSSLI NTLVDIAGLA RTSRTPGRTR
LVNWFQIVPA KGKPMLFVDL PGYGYAKVPT AMRASWRPLI EDYLSDRATL RALVVLIDAR
RGAQEEEIDL LDWLRSAEVP AITVVTKADK LSKNKRKPAA AEIQRDLGLR RPPILFSSLS
GDGLNDLWQA IARKVSAR
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