| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5566 |
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| Symbol | |
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| ID | 8547980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7641204 |
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| End bp | 7642850 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646390239 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit |
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| Protein accession | YP_003269941 |
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| Protein GI | 262198732 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAT TTCAGTACCA GGACATGTTG CCCCTCGGCG CCGATGACAC CGACTACCGG
CTGATCACCA AGGACGGGAT CTCCACCTTC GAGGCCGGCG GACAGACCTT CGTGCGCGTC
GAGCCCGAGG TGCTCACCCA GCTCGCGCGC GAGGCCATGC GCGACATCGC CCACCTGCTG
CGGCCCAGTC ACCTCAGCCA GTTGCGGCGC ATCCTCGACG ATCCCGAGGC CTCGGATAAC
GATCGCTTCG TGGCGCTCGA CCTGCTCAAG AACGCCAACA TCGCGGCCGG CGGCGTGCTG
CCGATGTGTC AGGACACTGG CACGGCCATC ATCAAGGGCA AGAAGGGCCA GAACATCTTC
ACCGGCGGCG GCGATGAGGT GGCGCTGGCC CGCGGTGTCT ACGACACCTA TCAGAGCGGC
AACCTGCGCT ACTCGCAGCT CGCGCCGCTC ACGATGTACA CGGAGAAGAA CACCAAGAAC
AATCTGCCGG CGCAGATCGA AATCGCCGCG ATTGACGGCA GCGCCTACAA GTTCTTGTTC
ATGGCCAAAG GCGGCGGTTC GGCCAACAAG AGCTACCTGT ACCAGGAGAC CAAGGCGCTG
CTCAATCCCG AGAGTCTGCT GGCCTTTGTG GACGCCAAGA TCCGCAGCCT GGGCACGGCC
GCGTGCCCGC CCTACCACCT GGCCGTGGTG GTCGGCGGCA CCTCGGCCGA GTACTCGCTG
GCGGTGGCCA AGCTGGCCAG CGCGCGTTAT CTCGACAGCC TGCCGCCGCA GGGCAACGAG
CTTGGCCACG GCTTCCGCGA CCGCGAGCTC GAGGAGCAGA TCCACGGGCT GACGCGCAAG
TCCGGCATCG GCGCGCAGTT TGGCGGCAAG TACTTCTGCC ACGACGTGCG CGTGATCCGC
CTGCCGCGCC ACGGCGCCTC GTGCCCGGTG GCGGTCGCGG TGTCGTGTTC GGCCGACCGG
CAGGCGCTGG CCAAGATCAC GGCCGAGGGC GTGTTCCTCG AGGCGCTGGA GCGCGATCCC
GCCAAGTACT TGCCGGAGAC CACGGCCTCG GAGCTCGACG GGGACGTCGT ACGCGTGGAC
CTCAACCAGC CGATGAACGA CATCCGCGCG CTGCTGAGCC GCTATCCCAT CAAGACCCGG
CTCTCGCTCA CCGGCACCGT GGTCGTGGCC CGCGACATCG CCCACGCCAA GCTCAAGGAG
CGCCTCGACG CCGGCGAGGG CATGCCCGAG TATCTGCGCG ATCACCCCGT GTACTACGCG
GGCCCGGCCA AGACCCCGGA GGGTTACGCC TCGGGCTCGT TCGGGCCGAC CACGGCCAGC
CGCATGGACC CCTACGTCGA TCTCTTCCAG GAGCACGGCG GCAGCATGGT CATGCTCGCC
AAGGGCAACC GCTCGCGCGC GGTCACCGAG GCGTGTCACA AGCACGGCGG CTTCTATCTG
GGCTCGATCG GCGGCCCGGC CGCGCGCCTG GCCAAGGACT GCATCAAGAA GGTCGAGGTG
CTCGAGTACC CCGAGCTGGG CATGGAGGCG GTGTGGCGTA TCGAGGTCGA GGATTTCCCC
GCCTTCATCG TCGTCGACGA CAAGGGCAAC GACTTCTTCG CCGACATCGC CAGCGGCAGC
AGCCGCAAGC TCGACGTGCT GAGCTGA
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| Protein sequence | MSEFQYQDML PLGADDTDYR LITKDGISTF EAGGQTFVRV EPEVLTQLAR EAMRDIAHLL
RPSHLSQLRR ILDDPEASDN DRFVALDLLK NANIAAGGVL PMCQDTGTAI IKGKKGQNIF
TGGGDEVALA RGVYDTYQSG NLRYSQLAPL TMYTEKNTKN NLPAQIEIAA IDGSAYKFLF
MAKGGGSANK SYLYQETKAL LNPESLLAFV DAKIRSLGTA ACPPYHLAVV VGGTSAEYSL
AVAKLASARY LDSLPPQGNE LGHGFRDREL EEQIHGLTRK SGIGAQFGGK YFCHDVRVIR
LPRHGASCPV AVAVSCSADR QALAKITAEG VFLEALERDP AKYLPETTAS ELDGDVVRVD
LNQPMNDIRA LLSRYPIKTR LSLTGTVVVA RDIAHAKLKE RLDAGEGMPE YLRDHPVYYA
GPAKTPEGYA SGSFGPTTAS RMDPYVDLFQ EHGGSMVMLA KGNRSRAVTE ACHKHGGFYL
GSIGGPAARL AKDCIKKVEV LEYPELGMEA VWRIEVEDFP AFIVVDDKGN DFFADIASGS
SRKLDVLS
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