| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5554 |
|---|
| Symbol | |
|---|
| ID | 8547968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7621548 |
|---|
| End bp | 7622921 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646390227 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003269929 |
|---|
| Protein GI | 262198720 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.442133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGCG CGATCATCGT CCTTTGCATC CTGCTCCTGG CCGGCGCGGC CACCTTTGGC
GTGTTGGCGT ACCGCGAGGT CGAGCGCCAG GGCGAGCGTC TCGAGGCGGC CTTTGCGCAG
CAGCGCAGCG AGGCCGCGCA AGCGCTCGCC GCGCATCGCG AGCAGTTCCT CGCCGACCAG
GCCTGGCTCG CTGAGTCGGG ACTTTGGCCC ACGGCCTCGG CCGAGGTCCC GGCCGAACGC
GACGCCGCCG GGTTGCTCAA CCCAGCGCTG TCGTGGACCG GGCCGCTGAG CGAGGACGAG
GGCGCGGCCA CAAGCGCGCT GCTGACGTTG CCCGAGCCGG TGCGGCAGGC GCTCGACCAG
CCCGCGCTGT GGCAGGAGCG CGAGCTCACC TGGCTCGAGG ACGAAGAGGC GCAGCAGATG
ATCCGCGCGC TCGATACCGG ATGGATGGCC AAGCTGTCCG AATTCGATCG CTGGAGCCTG
GAGCGCGAAG GGCCGATGGC GGCGGTTTTG AGCCGGCCGG ATGCCGAGCT CGACGTCACC
GAGACCGCGC TGCCGAGCTA CATCGTCCTG CGCCACTGGG TGCAGGTGCG GGTGTATCAA
GCGCTCCTCG CCGAGGACGC CGCCGAGGGC GAGGACGCCG CGGATGGCGA GGACACAGCG
GATGGCGAGG ACGCGGCGGG TGACGGGGAC GCGGCGGAGG GCGAAGGCGG CGAGGAGGTC
GCGGCCGACG ACAGCGCGGC CGAGGCCGCG GCGGCCGAGA TCCGGCAGCT CGTGCGGCTG
ATGTTTTCGA CCGAGGAGAC GATCTCTGCG ATCTTCGCCA CCGCGCTGGT CGCCTATGTT
CACGATATCG CCGAGAAGGC TGACCAGCCA GCGCTGCGTA TCGTCACCAG CGCTGACGAG
CTCGCGCGTT TGCAGCGCGT GGTCCGGGCC ACGGCGATGC TGCTGCAGCC GAGCCTGGGC
CCGGAGTACC GCGAGCTATT CGCGGCCATG CCGATCGGCC ACTGCCTGGC GCTCGGCGAC
GCGGTGGTCG CCGGCATCGC CCAGTTCGAA CCGGTGCTGC GCCACGCCAT CCCCGAGTAC
ATCGACCGCG TGTCCGAAGT TCTCGCGGCG CACGACGAGT GCCGGGTGCC GCTGCTGCGC
CGGGTGTGGG ACAATGAGGA CTGGCTGCGC GCGCGCATGG GCGGCCGCGA GCTGTTCGAG
CGCGAGGGCA TCGGTGGCGA CGAAGGCGGC GAGCTTGGCG AGGTCGAGGC CGGCGGCGAC
GTCTTCGCCG TGGCCGAGAG CGAGTGGGTG AGCAAGCGCG TGGCCTGGAT ACTCCTGAGC
ACGGCCGCCG TCGATCCCTG GGCCGGCTAC CGCCCCGAGC CCGCCGCGCC CTGA
|
|---|
| Protein sequence | MKRAIIVLCI LLLAGAATFG VLAYREVERQ GERLEAAFAQ QRSEAAQALA AHREQFLADQ
AWLAESGLWP TASAEVPAER DAAGLLNPAL SWTGPLSEDE GAATSALLTL PEPVRQALDQ
PALWQERELT WLEDEEAQQM IRALDTGWMA KLSEFDRWSL EREGPMAAVL SRPDAELDVT
ETALPSYIVL RHWVQVRVYQ ALLAEDAAEG EDAADGEDTA DGEDAAGDGD AAEGEGGEEV
AADDSAAEAA AAEIRQLVRL MFSTEETISA IFATALVAYV HDIAEKADQP ALRIVTSADE
LARLQRVVRA TAMLLQPSLG PEYRELFAAM PIGHCLALGD AVVAGIAQFE PVLRHAIPEY
IDRVSEVLAA HDECRVPLLR RVWDNEDWLR ARMGGRELFE REGIGGDEGG ELGEVEAGGD
VFAVAESEWV SKRVAWILLS TAAVDPWAGY RPEPAAP
|
|---|
| |