Gene Hoch_5535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5535 
Symbol 
ID8547948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7593633 
End bp7594586 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content72% 
IMG OID646390208 
Producthypothetical protein 
Protein accessionYP_003269911 
Protein GI262198702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC CGACGCCACC GCCGCGCTCG CCCACCGCAC CGCCCGCGGC CTTTGTGCCC 
GCCGAATACG AGTGGTTGCT GCTGCGCTTC GACGCCGACG CCGCCGCGCG CGACGCCGCG
CTCTTCGAGC GGGTGAGCGC CGCCGTGGCC GGGCATTCGC CGCTGCGCGT GCTCGACCTG
GGGGCCGGGG CGGGCGCCAA CCTGCTGCAT CTGGCGCCGC GCCTACCGGC CTCGGTGCAG
CACTGGACCG CGGTCGACCG CGACGCCGCG CTGGTCGGGC GCATGGCCGC CGGTCTCGAG
CACATGAGCG AGCATCTGCG CGCCCGCGGG GACGAGGTCG AGTGTCACGG GCGCTCGCTG
CGCTTCGGCG ATCGCCGCGT GCGCTACCGT ACGCTCACGG GCGACTTTCT CGACCCCGAC
GACGCGATCT ATCACGAGTC CTGGGATCTG GTGGTCGCCA ACGCGGTCTT CGACCTGCTG
TCCGCCGCGC AGTTCGCGCG CTTTCTCGAG CTGGCGAAGC AGCGCTGGTG CGAGCGCCTG
CCGCCGATGT ACTTCACCAT CAATCTCGAT ATCGGGCTCG CGTTCGAGCC CGCGCATCCG
CTCGACGACG CCGTGCGCGC GCATTTTCAC GCGCACATGC AGCGGCCGCA GTATTTCGGA
CGCGCGCTCG GCGCCGACTG CGCGCGCGAG CTGGTGCGCA TCGCCGAGGA CGCCGGCATG
GTGGTCGAGA CCGGGGCCAG TCCGTGGCGC ATCGGGGCCG AGGAGCGCGC GGCCTTGCGG
GCCAATTTCG ACTTCTTCGA CAGCGCGGTG CGCGAGCTCA TCGCCGCTGG CAGCGCCTCG
CTCGCGCCCG AGGACTTCGC GCGCTGGCTC GACGAGCGCC GCGCTCAGAT CGACGCGGGC
GAGCTGTCGC TCACTGTCGA ACACCAAGAT CTGTGGTGCC GTTTCCCGGC GTGA
 
Protein sequence
MSEPTPPPRS PTAPPAAFVP AEYEWLLLRF DADAAARDAA LFERVSAAVA GHSPLRVLDL 
GAGAGANLLH LAPRLPASVQ HWTAVDRDAA LVGRMAAGLE HMSEHLRARG DEVECHGRSL
RFGDRRVRYR TLTGDFLDPD DAIYHESWDL VVANAVFDLL SAAQFARFLE LAKQRWCERL
PPMYFTINLD IGLAFEPAHP LDDAVRAHFH AHMQRPQYFG RALGADCARE LVRIAEDAGM
VVETGASPWR IGAEERAALR ANFDFFDSAV RELIAAGSAS LAPEDFARWL DERRAQIDAG
ELSLTVEHQD LWCRFPA