| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5465 |
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| Symbol | |
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| ID | 8547878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7503165 |
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| End bp | 7504010 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 646390138 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003269841 |
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| Protein GI | 262198632 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.112319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAT TGAGAGTAGG CGATTTCTTC GAAAACATCA TCGAGTGGCT CAGGGAGAAC
TTCGAGGGCG TATTCGACGC CATCGGCGCG GCCATCACGA CCGGCGTAGA TGTCTTCAAA
GCCGGCCTGC ACCTGCCGCC TTCGTGGGTG CTGGTGCTCG TGTTTGCGCT CATCGCCTGG
CGCATGAGCG GCATCGGTAT GGGCATCTTC ACCCTGCTCG GCATGCTGCT CATCGACTCC
ATGGGCCTGT GGGCGCCGAC CATGGACACC CTGGCCCTGG TCATCGCCTC GGTGGTGATC
GCGCTGCTGA TCTCGGTGCC CATCGGCATC TGGGCGTCGA AGAGCGACAC CGCGGCCCAC
GTGGTGCGGC CGGTGCTCGA CTTCATGCAG ACCCTGCCGG CCTTTGTGTA CCTGATCCCG
GCCGTGCTGT TCTTTCAGCT CGGCGAGGTG CCCGGCGTCA TCGCCACCCT GATCTTCGCC
ATGCCGCCGG CCGTGCGGCT TACCAACCTG GGGATTCGCC AGGTGCCAAA AGACATCAAA
GAGGCCGCGG TCTCGTTCGG TTCGACACCG AGCCAGATGC TGTTCAAGGC CGAGCTTCCG
GTGGCCATGC CGACGATTCT CGCCGGCGTC AATCAGACCA TCATGCTGGC GCTGTCGATG
GTGGTCATCA CCGGCATGAT CGGCGCTGGC GGCCTCGGCA ATCAGGTCCT CAAAGGCATT
ACCCAGCTCC AGATCGGGCT GGGCTTCGAG AGCGGTATCG CGATCGTCAT CTTGGCGATT
TTCCTCGACC GCATCACCCA GTCGCTGGGG CAACCCCGCA GCCAGCGCAG AGCGCGAAAG
GCGTAG
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| Protein sequence | MIELRVGDFF ENIIEWLREN FEGVFDAIGA AITTGVDVFK AGLHLPPSWV LVLVFALIAW
RMSGIGMGIF TLLGMLLIDS MGLWAPTMDT LALVIASVVI ALLISVPIGI WASKSDTAAH
VVRPVLDFMQ TLPAFVYLIP AVLFFQLGEV PGVIATLIFA MPPAVRLTNL GIRQVPKDIK
EAAVSFGSTP SQMLFKAELP VAMPTILAGV NQTIMLALSM VVITGMIGAG GLGNQVLKGI
TQLQIGLGFE SGIAIVILAI FLDRITQSLG QPRSQRRARK A
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