Gene Hoch_5457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5457 
Symbol 
ID8547870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7490967 
End bp7491566 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content74% 
IMG OID646390130 
Productbiotin/lipoyl attachment domain-containing protein 
Protein accessionYP_003269833 
Protein GI262198624 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0707918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.318166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG TCCACACGTC CGAACTCAGC GCCCTGCTCA GCGTCGAGGA CGAGCGCATC 
CTGCTGCGCG CGCCCGCGCT CGGCCTGTGG CGCGCGGCGC CGCCCGAAGG CGCCGTGATC
CGGCCCGGCG ACCGCATCGG CCAGCTCGAG ATCCTGGGCG CGCTGCACAC CGTGCTCGCG
CCCGCCAAGG CCCGCGGCGC GGTCGTCGGC CCGGCCCGCG AGGAGGCGCT GGCGCGCCGC
CCCATGGCCT ACGGCGATGT CATGTTGGTG CTCGATCCCG CGGCCGCGAG CGGCGGCGCC
CTGGCCGCCG AAGCCGCCGC TGAGGCCCAG GCCGGCGCGC TCGAGAACGC CGGCCCCAGC
TTCCGCGCGC CCATCAGCGG CCGCTTCTAC GCCCGGCCCG CGCCCGAGCG GCCGGCGTTC
GTCCAGGTGG GCGACGAAAT CAGCGTCGGC CAGACCGTGT GCCTGATCGA AGTCATGAAG
ACCTTCCATC GCGTCACCTA CGGCGGCAAA GGCCTGCCCG AGCGCGCTCG CGTGGCCGCT
ATCGCGCCCG CCGAGGACAG CGACATCGCC TCCGGCGACA TCATCCTGGT CCTCGAATAA
 
Protein sequence
MSTVHTSELS ALLSVEDERI LLRAPALGLW RAAPPEGAVI RPGDRIGQLE ILGALHTVLA 
PAKARGAVVG PAREEALARR PMAYGDVMLV LDPAAASGGA LAAEAAAEAQ AGALENAGPS
FRAPISGRFY ARPAPERPAF VQVGDEISVG QTVCLIEVMK TFHRVTYGGK GLPERARVAA
IAPAEDSDIA SGDIILVLE