Gene Hoch_5449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5449 
Symbol 
ID8547862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7480706 
End bp7481545 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID646390122 
Producthypothetical protein 
Protein accessionYP_003269825 
Protein GI262198616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.139847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG TCGCGCGCGA TCCCGCTTGG GCCGATGAGC TGGTGGTGGC CTGGCCCGAG 
CCTGTGCCGT GGAACGCCGA GATCGTCTGC GGTGAGGACG AGGTCGCCGT GGTGTGCATC
GACTGGATGG TCGGCGACCA GCTCGGCCCC GGGCGGCACA CGCTCAACAT GCACAATCCG
TCGTCGTACG TGTCCGTGTA CTTCGTGCGC ACGGCCCCGG CGACGGCGTC CTTCGACGAG
CAGGTCAGCG TCTTCGACCG CACCACGGGC AAGATGTCTC AGGTGCAGTA CACGGGCGCG
GTGACGGTTC AGGTCGGCGA TCCCATGCTG CTGTGCAGCC AGTTCCTCGG CGTCCCCGCC
CAGGAGCTGG GCACCGGCGT GCGCCGCAGC GCCAGCGCCA GCATCGCGGC CGCGCTCAAG
GTGATGATCC ACAAGGTGCT CGCCAGCTCG CCGCAGGTGT CGGTGCTGGC CACGCCCAAC
GCGGTCACCC AGCTCGTGTA CATGACGGCC AGCGGCAATC CCATGGCCAT CGCCGTCAAC
GGCATCGACT TTCTCGGCTT CGAGCAGCTC GCGCTCGCGG TCGACGGCGG GCAAGCGGTG
CAGGCCGCGC TCAGCGAGGA GCGCGCGGCG GCCGAGCCCG GCCCGGCGAC GCTGCGCCTC
GACACCAGCA ACGATGAGGC TGTGTTCGCG GTGGGCGACG ACGTGCTGGT GTACGTCGAG
GACAGCGGAC GCTGGCACGC GGGCAAGGTC CACCAGATCC TCGACGCGGG CTACGAGGTC
GCGATCGACG GCAGCTCCGA TCTCACCTGG GTCGAAGCCA GCCGCGTTCG CGCGCCGTAG
 
Protein sequence
MIVVARDPAW ADELVVAWPE PVPWNAEIVC GEDEVAVVCI DWMVGDQLGP GRHTLNMHNP 
SSYVSVYFVR TAPATASFDE QVSVFDRTTG KMSQVQYTGA VTVQVGDPML LCSQFLGVPA
QELGTGVRRS ASASIAAALK VMIHKVLASS PQVSVLATPN AVTQLVYMTA SGNPMAIAVN
GIDFLGFEQL ALAVDGGQAV QAALSEERAA AEPGPATLRL DTSNDEAVFA VGDDVLVYVE
DSGRWHAGKV HQILDAGYEV AIDGSSDLTW VEASRVRAP