| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5441 |
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| Symbol | |
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| ID | 8547854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7466313 |
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| End bp | 7467203 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 646390114 |
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| Product | Collagen triple helix repeat protein |
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| Protein accession | YP_003269817 |
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| Protein GI | 262198608 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.916377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0707326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCG ACCCGGGGCG CCGCGGACGC TGCTCCGACC CGGCGTCGCG GCCGGATTCG
CGCGCGCCTC GGCGCGCGGC GCTGCTCGCG TGTGCGCTCG CGCTGGGCTG CGCGGCCGCC
TGTCAGAACC CGCTGTCCCT GGGGCAGCCT GACGAGGCCG CGTCCCCCAC GCCGAGCGCG
CCGGGCGCGA CCCCGGCGGC GCCCGCGCCC GCTCCGGCAG CCGTCAAGCC CGGCGAGATC
GAGGCGCTGC GCGCGCAGCT CGAGGCCATG GACGCGCGGC TGGCGCGCAT CGAGAGCGAT
GGCGCCGGCG TGGACGTGCG CGCGGTGGCC GACGCGCTGG CCGCCCAGGG CCCGGCCTCG
GGCCTCAGCG GTCCGGCGGG TGAGCAGGGT CCGCCCGGGC CGCAGGGCGA GACCGGCGTG
GCGGGTCCCG AGGGCCCCGC GGGCGCACAG GGGCCGGTCG GTCCCGCCGG GCCGCAGGGG
GCCAAGGGCG ACCGCGGACC GCCCGGGCCC GCTGGGCCGC AGGGCGTCCA GGGCTTGCAG
GGGCCGCAGG GCTTGCAGGG ACCGCAGGGC ATCGAGGGTC CGCAAGGGCC GCCCGGGCCG
CCCGGCGCCT ACGCGCGCAA GACCGACTTG AACCGCCGCG AGCAGCGCCT GGTGGTCGGC
CCCGGCCTGG TCGCCTCGGC GCAGGCGCGC TGCGACCGCG TCACCGATCT GCTGGTCACC
GGCGGCTGTC AGGCCGAGCC GGCGTGGATG GGGCGGCTGC TCGTGGCTCA GCCCTTCGCC
GTGCTCGACG CCTCGCTGCA AGGCGGCTGG CGCTGCGACT ACCAGAACAC CTCGGACACC
GGCGAGATCG AGATCGTCGC CGAGGTCTAC TGCGCGGCCG AGAGCAACTA G
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| Protein sequence | MAGDPGRRGR CSDPASRPDS RAPRRAALLA CALALGCAAA CQNPLSLGQP DEAASPTPSA
PGATPAAPAP APAAVKPGEI EALRAQLEAM DARLARIESD GAGVDVRAVA DALAAQGPAS
GLSGPAGEQG PPGPQGETGV AGPEGPAGAQ GPVGPAGPQG AKGDRGPPGP AGPQGVQGLQ
GPQGLQGPQG IEGPQGPPGP PGAYARKTDL NRREQRLVVG PGLVASAQAR CDRVTDLLVT
GGCQAEPAWM GRLLVAQPFA VLDASLQGGW RCDYQNTSDT GEIEIVAEVY CAAESN
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