Gene Hoch_5326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5326 
Symbol 
ID8547738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7322488 
End bp7323162 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID646390000 
Producthypothetical protein 
Protein accessionYP_003269704 
Protein GI262198495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGC TTCGACAAGC TCTCATCGCG GTACTGGCCG TGATCGCGGC GGTGCTCAGC 
TCGCCCTTCA CCCGGCGCTG GTACCGGCGC TGGGGCGCCA CCGAGGAAGA GGACAAGCGC
ACGCTGCCGG GCGACGAGTT TTTGCCCCGG CCGCGGCTGT GCACCACGCG CGCGATCACC
ATCTTCGCGC CGGTGGCCAC GGTGTGGTCG TGGCTGGTGC AGATCGGCCA GGGCCGCGGC
GGCTTCTACT CCTACGAGTC GCTCGAGAAC CTGGCCGGCT GCGACGTCCA CGACGCCGAC
CGCATCGTCA CCGCGCTGCA GAACATCCAG GTCGGCGACC GCATCCGCTT CGGCCCCGAG
GGCTACCCGC GCTTCCGCGT CGTCGCCGTG GATCGCGCCC GCTCGCTGGT CCTGCAGCGC
CGCGACGACA CCTCGCACAC CATCTGGAGC TTCACCCTCG AGACCAACCC GGTCGGCGAT
ACTCGCCTGC TGGTCCGCGA CCGCACCGAC TTCGCGCGCA CGCTGCGCCA GCACGCGGTG
TGGCGGCTGC TCAACGAGCC CGTGCACTTC GTCATGGAGC GCAAGATGCT CCTCGGTCTC
AAGGAGCGCG CCGAACGCCA GGCGCGCAGC GAGAACTCGC GCTACCTGCG CCCCGCGTCC
ACGCGCAGCG CCTGA
 
Protein sequence
MQRLRQALIA VLAVIAAVLS SPFTRRWYRR WGATEEEDKR TLPGDEFLPR PRLCTTRAIT 
IFAPVATVWS WLVQIGQGRG GFYSYESLEN LAGCDVHDAD RIVTALQNIQ VGDRIRFGPE
GYPRFRVVAV DRARSLVLQR RDDTSHTIWS FTLETNPVGD TRLLVRDRTD FARTLRQHAV
WRLLNEPVHF VMERKMLLGL KERAERQARS ENSRYLRPAS TRSA