Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5311 |
Symbol | |
ID | 8547723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 7305034 |
End bp | 7305939 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646389985 |
Product | peptidase M50 |
Protein accession | YP_003269689 |
Protein GI | 262198480 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0783881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCCC GTTTGCGGAG CTATCGACTG GGTAGCTTGT TCGGGTTCCC CATCGAGGTG AACCTCAGCT TCCTCATCTT GCTCGGCGTC GTCTTCTTCC TCTGGGGCGG CCTGAGCGGG CTGCTCGTCA CCCTGATCGC GTTCGCGTCG GTGGTGCTGC ACGAGCTAGG TCACGCGCTC GTCGCCCGTC GCCTCAGCGT CCCCGTGGTC GGCATCGAGC TGCACTTCTT CGGCGGCGCC GCCAAGATGG TCGGCCAGCC CAAGCGCGCC AACGACGAAG TCCTGATCGC GGCCGCCGGT CCGGCCGTAT CCTTTGCGCT GGGCGCGGCC GGCTGGGTGC TCGCCAGCAT CACCGGCGCG CTCGGCATCG GCGCGCTGCA CACGCTGTTT CAGGCCATCG CCTGGATCAA CCTGATCGTC GCCCTGTTCA ACCTGGTGCC GGCGCTGCCC ATGGACGGCG GCCGCATCCT GCGCGCCCTG CTCACGCGCA AGTATCCCTT CGAACGCGCG ACCGAAATCG CCATCAAGGT GGCGCGCGGC TTCGCCATCG CCCTGGCCGT CTACGGCGTC GCGAGCGTGC AGCTCTACAT GCTGCTCCTG GCCGCGTTCC TGTGGTTCCT GGGCGCCACC GAGCTGCACA TGGCGCGCAT GATGCGCCAC GACTTCACCT ACGACCACCA GGGCTATCGC CGCTACGATC ACGCCAATGA CGTCGTGGTC ATGCCGCCCG GCGCGGCCGA CGAAGAGGAA GGCTACGGCG TCTGGGGTGC CCCCGGGGCG GGACGTCCCT TCGGTTTTCC CGGCTTTGGC GGCCCGAGCG GCCGCCGCGA TGGCGGTATC TTCTCCGCCG GCAAAGTCAT CGTGCGCCGC CGCGGCGGCC GCGTCGTCAT CGAAATCGAC GACTGA
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Protein sequence | MIPRLRSYRL GSLFGFPIEV NLSFLILLGV VFFLWGGLSG LLVTLIAFAS VVLHELGHAL VARRLSVPVV GIELHFFGGA AKMVGQPKRA NDEVLIAAAG PAVSFALGAA GWVLASITGA LGIGALHTLF QAIAWINLIV ALFNLVPALP MDGGRILRAL LTRKYPFERA TEIAIKVARG FAIALAVYGV ASVQLYMLLL AAFLWFLGAT ELHMARMMRH DFTYDHQGYR RYDHANDVVV MPPGAADEEE GYGVWGAPGA GRPFGFPGFG GPSGRRDGGI FSAGKVIVRR RGGRVVIEID D
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