Gene Hoch_5311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5311 
Symbol 
ID8547723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7305034 
End bp7305939 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID646389985 
Productpeptidase M50 
Protein accessionYP_003269689 
Protein GI262198480 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0783881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCCC GTTTGCGGAG CTATCGACTG GGTAGCTTGT TCGGGTTCCC CATCGAGGTG 
AACCTCAGCT TCCTCATCTT GCTCGGCGTC GTCTTCTTCC TCTGGGGCGG CCTGAGCGGG
CTGCTCGTCA CCCTGATCGC GTTCGCGTCG GTGGTGCTGC ACGAGCTAGG TCACGCGCTC
GTCGCCCGTC GCCTCAGCGT CCCCGTGGTC GGCATCGAGC TGCACTTCTT CGGCGGCGCC
GCCAAGATGG TCGGCCAGCC CAAGCGCGCC AACGACGAAG TCCTGATCGC GGCCGCCGGT
CCGGCCGTAT CCTTTGCGCT GGGCGCGGCC GGCTGGGTGC TCGCCAGCAT CACCGGCGCG
CTCGGCATCG GCGCGCTGCA CACGCTGTTT CAGGCCATCG CCTGGATCAA CCTGATCGTC
GCCCTGTTCA ACCTGGTGCC GGCGCTGCCC ATGGACGGCG GCCGCATCCT GCGCGCCCTG
CTCACGCGCA AGTATCCCTT CGAACGCGCG ACCGAAATCG CCATCAAGGT GGCGCGCGGC
TTCGCCATCG CCCTGGCCGT CTACGGCGTC GCGAGCGTGC AGCTCTACAT GCTGCTCCTG
GCCGCGTTCC TGTGGTTCCT GGGCGCCACC GAGCTGCACA TGGCGCGCAT GATGCGCCAC
GACTTCACCT ACGACCACCA GGGCTATCGC CGCTACGATC ACGCCAATGA CGTCGTGGTC
ATGCCGCCCG GCGCGGCCGA CGAAGAGGAA GGCTACGGCG TCTGGGGTGC CCCCGGGGCG
GGACGTCCCT TCGGTTTTCC CGGCTTTGGC GGCCCGAGCG GCCGCCGCGA TGGCGGTATC
TTCTCCGCCG GCAAAGTCAT CGTGCGCCGC CGCGGCGGCC GCGTCGTCAT CGAAATCGAC
GACTGA
 
Protein sequence
MIPRLRSYRL GSLFGFPIEV NLSFLILLGV VFFLWGGLSG LLVTLIAFAS VVLHELGHAL 
VARRLSVPVV GIELHFFGGA AKMVGQPKRA NDEVLIAAAG PAVSFALGAA GWVLASITGA
LGIGALHTLF QAIAWINLIV ALFNLVPALP MDGGRILRAL LTRKYPFERA TEIAIKVARG
FAIALAVYGV ASVQLYMLLL AAFLWFLGAT ELHMARMMRH DFTYDHQGYR RYDHANDVVV
MPPGAADEEE GYGVWGAPGA GRPFGFPGFG GPSGRRDGGI FSAGKVIVRR RGGRVVIEID
D