| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5281 |
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| Symbol | |
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| ID | 8547693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7260405 |
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| End bp | 7261682 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646389955 |
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| Product | putative aliphatic amidase expression-regulating protein |
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| Protein accession | YP_003269659 |
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| Protein GI | 262198450 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGAT CGAGCGAAAT CCACCGCCGC GAGCTACTGC GCGCCATGTT GGGAGGGGTG
TGCGGCGCCG GCCTGACTTT GGGCGCGGGC TGTCGAGCCG CGCGCGGTGA CGACCGCATC
CACGTGGGTG TATTGCATTC GCAGACCGGC ACCTTGGCCA TGAGCGAGCG CGCCGTGACC
GACGCTACGC TCATGGGACT CGAGGAGCTC AACACGCGCG GCGGTGTGGC CGGCAGGCGC
ATCGAGATCC ACCGCGCCGA TGGCGGCTCG GACGGCGAGC GCTTCGCGCG CGAGGCCGAG
CGCCTGATCC GCGATCACGG CGTCGTGGTC ATCTTCGGCT GCTGGACCTC GTGGAGTCGC
AAACTGGTCA AACAGGTCGT CGAGCGCCAC GACAACTTGC TGCTCTATCC CCTGCAATAC
GAGGGCATCG AGTCCTCGGG CAACATCGTC TATCTCGGCG AGGCGCCCAA TCAGCAGCTC
GCGCCGGCGG CGGCGTGGAG CTTCGATACC CTGGGGACGC GCTGTTTCCA CGTCGGCTCC
GACTACGTCT ATCCGCGGGT CGCGGGCGCC ATGTTGCGCG ACTACTGGAC CGCTCTGGGC
GGCGAGATGG TCGGCGACAT GTACCTGCCG CTGGGGAAGA CCGAGCTCGA CGAGGTGGTC
GACGCCATCG CGCGCGCCGA ACCCGACGTG GTCTTCAACA CCATCAACGG CGACAGCAAC
GTGCTGTTCT TTCGCCTGAT GCGCCGGGCG GGCTTCTCGC CGGACACCCT GCCGATCATG
TCCTTCAGCA TCGCCGAGGA TGAACTGCGC GCGCTCGACG CCGGCATGGT GGCCGGCAAC
TACGCCACCT GGAGCTATTT TCAGAGCCTC GACAGCGACG ACAATCGTCG CTTCATCGAG
CGCTTTCAGC GGCGTTTCGG CGCGGCCCGG GTGCTCAGCG CGCCGATGGA GGCCGCCTAC
GTGGGCACGC AGCTATGGGG GCAGGCGGTC GAGCGCGCCG GCACGGCGTC CTCGCACGCG
GTGAGTCACG CCATCCTGGG GCAGAGTTTG GCCGCGCCCG AGGGCATGGT CTACGTCGAC
ACCGGCAATC GCCATCTGTG GAAGAGCGTG CGCATTGGCC GCGCGCGTTC CGACGGGCAG
TTCGATATCC TGTGGGATTC GGGCAAGCCG GTGCGCCCCG AGCCCTATCC CATCACACGG
CCACGTTCGG CCTGGAGCGC GTATCTCGTC GAGCTCTACG AGGGATGGAA TGAGGAATGG
GTAAAGCCGC CGACATGA
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| Protein sequence | MTRSSEIHRR ELLRAMLGGV CGAGLTLGAG CRAARGDDRI HVGVLHSQTG TLAMSERAVT
DATLMGLEEL NTRGGVAGRR IEIHRADGGS DGERFAREAE RLIRDHGVVV IFGCWTSWSR
KLVKQVVERH DNLLLYPLQY EGIESSGNIV YLGEAPNQQL APAAAWSFDT LGTRCFHVGS
DYVYPRVAGA MLRDYWTALG GEMVGDMYLP LGKTELDEVV DAIARAEPDV VFNTINGDSN
VLFFRLMRRA GFSPDTLPIM SFSIAEDELR ALDAGMVAGN YATWSYFQSL DSDDNRRFIE
RFQRRFGAAR VLSAPMEAAY VGTQLWGQAV ERAGTASSHA VSHAILGQSL AAPEGMVYVD
TGNRHLWKSV RIGRARSDGQ FDILWDSGKP VRPEPYPITR PRSAWSAYLV ELYEGWNEEW
VKPPT
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