Gene Hoch_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5253 
Symbol 
ID8547665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7219788 
End bp7220816 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content71% 
IMG OID646389927 
ProductCheB methylesterase 
Protein accessionYP_003269631 
Protein GI262198422 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCAGA GCCGCGATAC CATCGTCATT GGCACCTCGT CGGGCGGGGT GAGCGCGCTG 
CGTACACTGC TCGGCCAACT CGACTCCGCG CTGCCGGCTG CGGTGTTGAT CGTTCAGCAT
CTGTCGCCGC GCAGCCCGGG CCAGCTCGTC GCCGTGCTCC AGCGGGCCAC GAGCATGCCC
GTCGCCTGGG TCGACGAACC GGTCGAAATC CGGCCCGGCC ACGTGTACGT GTACGTGGCG
CCGCCCGACA TGCATCTCAC GATCCGCGAG GATCGCGCTG AAGTGGTCCG CGGACCGCGC
GAGAACCGCG CGCGTCCCGC CATCAATCCG CTGTTCCGCA CCGCGGCGGC GGAGCGCGGT
GGTCGGGTCA TCGCGGTGCT GCTCACCGGC CTGCTCGACG ACGGCATCGC CGGGCTGGAG
TCGGTGCGCC GCTGCGGCGG TGTGACCGTG GTGCAAGATC CGGATGACGC TGAGTTCGCC
GAGATGCCGC AGCGGGCGCT GAGCGCGGAG CTCGCCGATC ACGTCTGCTG CCTGGCCGGG
ATGGGCGCGC TCTTGCGCAC GCTGGTCGGC CAGCCCGCGC CCGCGAGCGA GGTGCCGCAC
GCCATCACCG TCGAGGCGCG CATGAGCGGG CCGGGGCGGA GCACGCCGGA GGCGCTTACC
AGTATTGGCG ATCAGGTGCC TGCGTCGTGC CCCGAGTGCG GAGGGCCGCT GTGGGCGGTG
GGCGCGGGTG AGAGTTCGGT GTATCGCTGC CACACGGGCC ACGCGCTGTC GGCGCGCGCG
TTGCTCGAGA TGCAGGCCGA AGAGGTCGAG CGGTCGATGT GGGCGGCGGT GCGCGCCCTG
ACCGAACGCG CCGCGGTTCT CGAACGCATG GCCGGCGACG CCGAGGCCCG CGGTCACCAT
CGCGGCGGTG ACGTATTTCG CGAGCGGGCG CGCGAGGACT GGGCGCACTC CGAGCAGGCG
CGGCAGTATC TCTTGTCACT GCGCGAGAAC CTGCCGCGCG AGCCCGAAGC AACTGGGACA
AGAGAATGA
 
Protein sequence
MSQSRDTIVI GTSSGGVSAL RTLLGQLDSA LPAAVLIVQH LSPRSPGQLV AVLQRATSMP 
VAWVDEPVEI RPGHVYVYVA PPDMHLTIRE DRAEVVRGPR ENRARPAINP LFRTAAAERG
GRVIAVLLTG LLDDGIAGLE SVRRCGGVTV VQDPDDAEFA EMPQRALSAE LADHVCCLAG
MGALLRTLVG QPAPASEVPH AITVEARMSG PGRSTPEALT SIGDQVPASC PECGGPLWAV
GAGESSVYRC HTGHALSARA LLEMQAEEVE RSMWAAVRAL TERAAVLERM AGDAEARGHH
RGGDVFRERA REDWAHSEQA RQYLLSLREN LPREPEATGT RE