Gene Hoch_5237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5237 
Symbol 
ID8547649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7194572 
End bp7195429 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID646389911 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003269615 
Protein GI262198406 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.300645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCTG CCGATTGGCT CAAGCAGCGC GTCGACGCCC TGGTCGAGCG ACACCTGGGC 
CCCAAGCTCG TGCGTCGCTG CGAGGCGCTG AGCACGCGCC GCAACGAGTA CGGCTACGAT
CCCTTCGGCT TCCACCCCGG CAGCCTCAAG TATCCGCTGG TGGTCGCGCG CTGGCTCTAC
CGCCACTACT TCCGCTGCGA GACCCGGGGC ATGGAGAACA TCCCCAGCGA CGGCCCGTGT
CTGCTGGTCG CCAACCACTC GGGCCAGCTC CCCTTCGACG CGCTGGTCAT CCTCACCGCC
GTGATGCTCG AGGCGCCGCA GCCGCGGGTC GCGCGCACCA TGGTCGAGCG CTTCGTGCCG
ACGCTGCCCT TCGTGTCGTA TCTCTATCCG CGCTGGGGTC AGATCACGGG CACGCCCGAG
AACTGTCGCC GGCTGCTGGC CGACGACGAG ATGATCCTGG TGTTTCCCGA GGGCGCGGCC
GGCATCTCCA AGCCGTTCTC GCACCGCTAT CAGCTCCAGG GCTTCGGCCA CGGCTTCCTG
CGCCTGGCGC TCGAGACCGG CGCCCCGGTG GTGCCCATCG CCGTGGTCGG CGCCGAGGAG
CAAGCGCCCG CGCTCAATTC CAAGTGGCTG GCCAAGCTCG CCGGCACGCC GGCCTTTCCC
ATCGTGCCGT ATCCGCCCTT CGTGCCGATC GTGCCGCTGC CGGTCAAGTA CCGCCTGCTG
GTCGGCGAGC CCATGTATTT CGAGGGCGAT CCCGACGACG AGGACGAGCT GCTGGCGCCG
CGCGTACGGG CGGTCAAAAA CCGCATCCGC ACGCTGATGC ACCAGGGCCT CAGGGAGCGC
GACCATGTCT TCTGGTGA
 
Protein sequence
MAPADWLKQR VDALVERHLG PKLVRRCEAL STRRNEYGYD PFGFHPGSLK YPLVVARWLY 
RHYFRCETRG MENIPSDGPC LLVANHSGQL PFDALVILTA VMLEAPQPRV ARTMVERFVP
TLPFVSYLYP RWGQITGTPE NCRRLLADDE MILVFPEGAA GISKPFSHRY QLQGFGHGFL
RLALETGAPV VPIAVVGAEE QAPALNSKWL AKLAGTPAFP IVPYPPFVPI VPLPVKYRLL
VGEPMYFEGD PDDEDELLAP RVRAVKNRIR TLMHQGLRER DHVFW