Gene Hoch_5233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5233 
Symbol 
ID8547645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7191876 
End bp7192301 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content70% 
IMG OID646389907 
Producthypothetical protein 
Protein accessionYP_003269611 
Protein GI262198402 
COG category[S] Function unknown 
COG ID[COG4323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.187263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC ACACGCCGAA GATGACGACC TTCGAGGAAT TCTGGCCCTA CTACGTCTCG 
CAGCATCTCG ACCCGACCTG CCGCAAGCTC CACTTCGTGG GCACCTCGCT GGCGCTCGGA
TGTCTGGCGC TGGCACCGTT CAAGCCCTCG GCCCTGCTCG CCGCGCCGGT CTTCGGCTAC
GGCTTCGCGT GGGCCGGCCA CGCCCTGTTC GAGAAGAACC GGCCGGCCAC CTTCACGCAT
CCGCTGTGGT CGCTGCGCGG CGACTTCCGC ATGTGGTGGC TCACCTGCCA GGGGCGCATG
GAGCCCGAGC TCGAGCGCGC CCGCGCGATG TTCGCCGAGT ACATGGCCGG CGCCACGGGC
GAGGGCGAGG GAGAGGGCGA GGACGAGCTC GACGGCCCCG GTGCGCGCGT CTCGCGCGCG
CTGTGA
 
Protein sequence
MSEHTPKMTT FEEFWPYYVS QHLDPTCRKL HFVGTSLALG CLALAPFKPS ALLAAPVFGY 
GFAWAGHALF EKNRPATFTH PLWSLRGDFR MWWLTCQGRM EPELERARAM FAEYMAGATG
EGEGEGEDEL DGPGARVSRA L