Gene Hoch_5194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5194 
Symbol 
ID8547606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7148194 
End bp7149288 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content76% 
IMG OID646389871 
Productxanthine dehydrogenase accessory protein XdhC 
Protein accessionYP_003269575 
Protein GI262198366 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID[TIGR02964] xanthine dehydrogenase accessory protein XdhC 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCC TCAGGCAGGC GCTCACACGC GCCGAAGCGG GCGAGGCCCT GGCGCTGGTG 
ACCGTGGTCG CGGTGCGCGG CTCGGCGCCG CGGCATCTGG GCACCAAGAT GCTCGTGGAC
GCGAGCGGCG TGGCCACCGG GACCATCGGC GGCGGCGCCA TCGAGCGCGA GGCCACGCGG
CTGGGCGCCG AGGTCGCGGC CGGCGCGCCG GCGCAGCGCC TGCGCCAGCA CCTGGTGCGC
GACCTGGCGA TGTGTTGCGG CGGCAGCATG GAGCTGTATC TCGAGCCGGT GGCGGCCAGC
CTCGATGCCC TGCGCGAGGC CCTGGCGCTG TACGACGCGC GCACCCCGGC GCGCCTGATC
ACCACCTTCG ACGGCGCGCC CAAGCGGGTC GAGCGCGCGG CCCCGGGCGC GGCGCGCGGC
CCGGCGGTGG AGCGCGTGGC GCCGGGCGCT GCCGCGGACG CGGGCGAGCT GGCGCTGCCG
CACGCCGACG AGCGCCGGCT GATCGAGCCG GTGAGCCCGC CCGAGCGGCT GGTGCTGTTC
GGCGCCGGGC ACGTGGCCCG CGCGATCGCG CCGCTGGCCG CCGGGCTCGA GTTTCGCGTG
GTGGTGTGCG ACGACGACGA GACCGGGGCG CTGAGCGCGC TGGGGACGCC GCCGTGGCTC
ACGCGCGCGG TGGATTCCTT CGATCTCTTC GACGTCGAGG CCGCCATCGG TCCGCTGGGC
ACCGGCGACT TCGTGCTCAT CGTGACCCGC GACCACGCCG TGGACGAGAG CATCCTGGCC
CGGCTGCTCG GCAACGACAC GCTCAGCTAT CTCGGCCTGA TCGGCAGCCG CGGCAAAGTC
GGCCGCTTCC GCAAGCGCCT GGAGGCCAAG GGCGTGGCCA CCCACGAGCG CTGGGCGCGG
CTGCACGCGC CTATCGGTCT CGATATCGGC GCCGAGACCC CGGCCGAGAT CGCCATCGCC
GTGCTCGCCC AGCTCATCCA CGTGCGCCGG CGCGGCGCGC GCTCGGCTCT GGATTTCGCG
CCCGTGCACG CGGTGGCGCC GACGCCGCCG GCCGGTGCGC CCGCGATCGA GCGCCGCGGC
GGTGGCGCCG GGTGA
 
Protein sequence
MELLRQALTR AEAGEALALV TVVAVRGSAP RHLGTKMLVD ASGVATGTIG GGAIEREATR 
LGAEVAAGAP AQRLRQHLVR DLAMCCGGSM ELYLEPVAAS LDALREALAL YDARTPARLI
TTFDGAPKRV ERAAPGAARG PAVERVAPGA AADAGELALP HADERRLIEP VSPPERLVLF
GAGHVARAIA PLAAGLEFRV VVCDDDETGA LSALGTPPWL TRAVDSFDLF DVEAAIGPLG
TGDFVLIVTR DHAVDESILA RLLGNDTLSY LGLIGSRGKV GRFRKRLEAK GVATHERWAR
LHAPIGLDIG AETPAEIAIA VLAQLIHVRR RGARSALDFA PVHAVAPTPP AGAPAIERRG
GGAG