Gene Hoch_5164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5164 
Symbol 
ID8547576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7114143 
End bp7114808 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content76% 
IMG OID646389841 
Producthypothetical protein 
Protein accessionYP_003269545 
Protein GI262198336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.903907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATT CCCGCGCCAT CCACCATCGC TACCTCGATC CGCTCGAGCA GATCTGGCTC 
GAGACCGCCC GGCGCATCGG CCTGCGCATC GATCGCTCGC CCGAGGTCTA CGCCGCCAGC
GACGGTCGCG GCCGGCTCAC CATCGGCGCC GGCGACACCC TCGACGCCGA CGACAGCCTG
GCGCAGATGA TCTTCCACGA GCTGTGCCAC GCGCTGGTCG AGGGCCCGCA CTCGTTCGCC
GCGCCCGACT GGGGCCTCGA CAACACCAGC ATGCGCGACG CCGCGCGCGA GCACGCCTGC
CTGCGCACCC AGGCCGCGCT CACGGCCCCG CGCGGCCTGC ACCTCATCCT GGCCCCGACC
ACCGACTTCC GCGCCTTCTA CAATCGCCTC GATCCGCGGG CGCCGCTGGC CGAGCACGAA
CCCGAGGGCG ACGACGACGG CTCGGTGGCG CTGGCGCGCG CGGCGCTGGC GCGCGCGGGG
CAGCCACCCT GGGCGCCGCA TCTCGAGCGC GCCCTCGACG CCACCGAGCG CGTGGCCGCC
CTGGTCGCGC CCTTCGCCGC GCCCGAGGGC GACGCAAGCG GCGCGTACGC CGCCGCGCAC
AGCGACGACA CGCTACCGCC GCTGTGGCGG CTATGGCGCG CGCCCGACAG CGACAGCCGC
GGCTGA
 
Protein sequence
MTDSRAIHHR YLDPLEQIWL ETARRIGLRI DRSPEVYAAS DGRGRLTIGA GDTLDADDSL 
AQMIFHELCH ALVEGPHSFA APDWGLDNTS MRDAAREHAC LRTQAALTAP RGLHLILAPT
TDFRAFYNRL DPRAPLAEHE PEGDDDGSVA LARAALARAG QPPWAPHLER ALDATERVAA
LVAPFAAPEG DASGAYAAAH SDDTLPPLWR LWRAPDSDSR G