Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5107 |
Symbol | |
ID | 8547518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7038024 |
End bp | 7039784 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646389783 |
Product | response regulator receiver protein |
Protein accession | YP_003269488 |
Protein GI | 262198279 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.298176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCT TCTCGAGAGT GCTAGTGGTC TGCGCAGAGG CGCGTTTGGC AGAGGCCGTG CGCTTCGGCT TCGAACGCGC CGGCGCGAGG GTGTCCACCT GCGCCAGCGC CGACGAAGCC GCGGCCGCGT TTGCGGACGC CAGCGCGGTG CCCCGGGGCG GGCTCGAGGG CGAGCACGAG GATGGCGCCG CCGGGTCCGA ATCCGCGGAC GAGACGCGGC CGCCGGCCCT GATCGTCACC GGCGCGACCG AGGTCGCGGA CGCGCTCGCG CTGCTGCGTT CGCTGCGCGC GGGGCTGGCC GAGCACGCGC CCTCGGTGCC GGTGCTGTGT CTGGCGCCGC GCATGCTGTC GCGCGCCGAT GCGCTGGCCG CGGGCGCGAG CGAGCGGCTG CCGCAGCCCG CGCACCTGCG CGACGCGGTC ACGCTCGGCC GCATGCTGCT CGGCCGCAAC CGGCGCGGCG ACCGCGCGCA CGTGGTGCAA GGCCACCTCA GCGACTACGA GGGCGTGTTC TTCCTCGCCC GCGCGCTGGC CGCGGTGGGC CGCAGCGCGG TGCTCAGTCT GGTGCGCGGG CTGCGCCGCG GCGAGCTGCG CTTCCACCGC GGCGCGATCA CCTCGGCCCA GGTCGGCGCG CTGCACGGCA TGGCGGCGCT GCATCAGCTC CTGCTGTGGT CGCGCGCGCA CTTCGAGCTG CGCGACGAGG AGGTGGTGCC GCGCCGGCAG ATTCCGCTGT CGGCCAGCGA GATCCTGATC GACGCGGAGC GCTTTCTCTA CGATATGCGC TCGCTGCTGG GCGAGCTGAC GCCGGCGGGC GTGTACGCGC CCGCGCACGA GCGCTACCGC GGTCAGGAGC TGCCGCCGCA AGTGCGCCGC GTGCTGCGCC TGATCGACGG CTATCGGACC ATGGCCGACG TGGTCGAGGA TTCGCCGTAT CGCGTGCTGG AGACGCTGGC GATCTGTAAC CGCCTGCTGG CGCTCGAGTG GATCGTCCGC GTCGACGACA TGGATGGCGA GCGCGGCGCG TCGGTCGGCG GCGGCGTATC GGTCGAGCGC ATGCTGAGCG ACCGGCTGTC CGAAAGCTCG TCGGCCGCGA TCGGCTCGGT GGAGCTCGAG TCGCTCTCGG GCGATACCAA GCCCATGCGC ATGCTGCGCC GCGAGGCCAG CGCCTTCGAC GACGAGGACA CCGCCGACGG CCGCGGCGGG CGCGCCAGCG AGGTCGCCGG CGAGCCGGTG GATTGGTCAG ACGTGCTGCC CACGGAGATG GCGTCCGGGT TCTCGCCCGT GGTCCCGGCG ACCGCGGCCG CCGGCGAGAT CGAGGCGCAG CAGGATGACG GCGTGGTGCG CGCGTTCGCC CCCGAGCACA GCGGCGACGA GGAAGACGAC TCGAGCGCGC TCGCCCGGGG ACTGCGCGCG CGCACGCGCT CGACCCGCAT GCAGACCGCA CCGCATCCCG ATGACGGCGC CGAGGGCGAG GTCGAGCTGG CCTGGACGCC GGCGGCCAAG GCCGGCAAGG CCAGCAAGGC CGGTAAGGCT GGCAGAGGCG GCACCACCGG GCGCGGCGAG GGCGCGTCCA AGCGATCGCC GAGCGCGGCC CCGACGCGTC CGGCCGACGG CGCCGGCGAT GACGACCAGC GGCCCTCGCT GTGGCGGCGT ATTTTCGGAC GCGCCGAGGC ATCCGCGAGC GCGGACGATG AGGCGGCGCC CAAGGCCGGC GGCAAGCCCA ATCGCCGCGG CGCGAGCCGG CGACGCCGCA AGCGCCGCTG A
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Protein sequence | MSVFSRVLVV CAEARLAEAV RFGFERAGAR VSTCASADEA AAAFADASAV PRGGLEGEHE DGAAGSESAD ETRPPALIVT GATEVADALA LLRSLRAGLA EHAPSVPVLC LAPRMLSRAD ALAAGASERL PQPAHLRDAV TLGRMLLGRN RRGDRAHVVQ GHLSDYEGVF FLARALAAVG RSAVLSLVRG LRRGELRFHR GAITSAQVGA LHGMAALHQL LLWSRAHFEL RDEEVVPRRQ IPLSASEILI DAERFLYDMR SLLGELTPAG VYAPAHERYR GQELPPQVRR VLRLIDGYRT MADVVEDSPY RVLETLAICN RLLALEWIVR VDDMDGERGA SVGGGVSVER MLSDRLSESS SAAIGSVELE SLSGDTKPMR MLRREASAFD DEDTADGRGG RASEVAGEPV DWSDVLPTEM ASGFSPVVPA TAAAGEIEAQ QDDGVVRAFA PEHSGDEEDD SSALARGLRA RTRSTRMQTA PHPDDGAEGE VELAWTPAAK AGKASKAGKA GRGGTTGRGE GASKRSPSAA PTRPADGAGD DDQRPSLWRR IFGRAEASAS ADDEAAPKAG GKPNRRGASR RRRKRR
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